SEdb 2.0
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Gene overview

Strategies/Algorithm: lasso Ensembl ID: ENSG00000174327
Gene: SLC16A13 Gene type: protein_coding
Strand: + External links:
Genomic region: chr17:7036015-7040117 Genome Browser:

Super-enhancer search result of gene-based

GREAT Download bed
SE ID SE Region Sample ID Tissue type Biosample name SE rank Element Common SNP eQTL Risk SNP TFBS CRISPR Cas9 Gene
SE_02_095000941 chr17:7018951-7023759 Sample_02_0950 Umbilical vein HUVEC_WT 941 1 109 7 0 125 343 BCL6B,MIR497HG,ALOX12,RNASEK,SLC16A11,MIR195,MIR497,SLC16A13,C17ORF49,ALOX12-AS1,ELP5
SE_02_058500595 chr17:7018981-7023851 Sample_02_0585 Umbilical vein HUVEC 0hour 595 1 112 7 0 133 357 BCL6B,MIR497HG,ALOX12,RNASEK,SLC16A11,MIR195,MIR497,SLC16A13,C17ORF49,ALOX12-AS1,ELP5
SE_02_083100391 chr17:7019220-7023825 Sample_02_0831 Umblical vein HUVECs_TNF0min 391 1 107 5 0 132 341 BCL6B,MIR497HG,ALOX12,RNASEK,SLC16A11,MIR195,MIR497,SLC16A13,C17ORF49,ALOX12-AS1,ELP5
SE_02_083200163 chr17:7019313-7023862 Sample_02_0832 Umblical vein HUVECs_TNF30min 163 1 107 5 0 129 333 BCL6B,MIR497HG,ALOX12,RNASEK,SLC16A11,MIR195,MIR497,SLC16A13,C17ORF49,ALOX12-AS1,ELP5
SE_02_146900334 chr17:7021239-7027965 Sample_02_1469 Umbilical Vein HUVEC 334 1 190 7 0 126 844 BCL6B,ALOX12,RNASEK,SLC16A11,MIR497HG,MIR195,MIR497,SLC16A13,C17ORF49,ALOX12-AS1,ELP5
Genomic distribution of SEs associated with SLC16A13
Genome Browser

The strength of the tissue affected by the gene

Expression of SLC16A13

Cell line (ENCODE) Primary cell (ENCODE)Tissue (NCBI) Normal tissue (GTEx) Cell line (CCLE)