SEdb 2.0
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Gene overview

Strategies/Algorithm: lasso Ensembl ID: ENSG00000162723
Gene: SLAMF9 Gene type: protein_coding
Strand: - External links:
Genomic region: chr1:159951492-159954237 Genome Browser:

Super-enhancer search result of gene-based

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SE ID SE Region Sample ID Tissue type Biosample name SE rank Element Common SNP eQTL Risk SNP TFBS CRISPR Cas9 Gene
SE_02_132000652 chr1:159868451-159892023 Sample_02_1320 Connective Tissue HT1080_EWS-FLI1 652 6 619 62 15 152 898 CFAP45,SLAMF8,VSIG8,C1ORF204,TAGLN2,MIR4259,C1orf204,SLAMF9,IGSF8
SE_02_132200766 chr1:159868703-159891273 Sample_02_1322 Connective Tissue HT1080_WT 766 4 594 61 15 149 898 CFAP45,SLAMF8,VSIG8,C1ORF204,TAGLN2,MIR4259,C1orf204,SLAMF9,IGSF8
SE_02_076700465 chr1:159882268-159919056 Sample_02_0767 Ovary OVCA429 465 21 921 79 15 178 886 TAGLN2,MIR4259,CFAP45,VSIG8,C1ORF204,LINC01133,IGSF9,SLAMF9,C1orf204,IGSF8,PEA15,DUSP23,PIGM
SE_02_146400420 chr1:159889682-159918588 Sample_02_1464 Ovary CAOV4 420 7 701 51 7 105 445 TAGLN2,MIR4259,CFAP45,VSIG8,C1ORF204,LINC01133,IGSF9,SLAMF9,C1orf204,IGSF8,PEA15,DUSP23,PIGM
SE_02_146500390 chr1:159899354-159922158 Sample_02_1465 Ovary CAOV4cis 390 5 566 35 5 94 636 TAGLN2,MIR4259,CFAP45,VSIG8,C1ORF204,LINC01133,IGSF9,SLAMF9,C1orf204,IGSF8,PEA15,PIGM
SE_02_092900106 chr1:159903596-159926499 Sample_02_0929 Mid-gestation placenta trophoblast__CytT 106 17 563 34 4 143 912 TAGLN2,VSIG8,C1ORF204,CFAP45,LINC01133,IGSF9,SLAMF9,MIR4259,C1orf204,SLAMF8,CCDC19
SE_02_144900520 chr1:159907060-159926296 Sample_02_1449 Adipose SW872_YAP_TFE3 520 6 484 28 2 143 912 TAGLN2,VSIG8,CFAP45,LINC01133,IGSF9,SLAMF9,MIR4259,C1orf204
SE_02_084100471 chr1:159907434-159951532 Sample_02_0841 Blood THP-1_untr 471 9 1093 83 8 398 3143 TAGLN2,IGSF9,SLAMF9,VSIG8,CFAP45,LINC01133,MIR4259,C1orf204
SE_02_144700555 chr1:159907505-159926045 Sample_02_1447 Adipose SW872_CAMTA1 555 8 466 24 2 143 912 TAGLN2,VSIG8,CFAP45,LINC01133,IGSF9,SLAMF9,MIR4259,C1orf204
SE_02_144500955 chr1:159907560-159928575 Sample_02_1445 Adipose SW872_TAZ4SA 955 6 525 34 2 163 1250 TAGLN2,IGSF9,VSIG8,CFAP45,LINC01133,SLAMF9,MIR4259,C1orf204
SE_02_151300455 chr1:159909238-159926401 Sample_02_1513 Lung Transitional AT2->1 cells 455 5 432 24 1 143 912 TAGLN2,VSIG8,CFAP45,LINC01133,IGSF9,SLAMF9,MIR4259,FCRL6,SLAMF8
SE_02_158200133 chr1:159909479-159926406 Sample_02_1582 Renal OS-RC-2 133 9 424 24 1 143 912 TAGLN2,VSIG8,CFAP45,LINC01133,IGSF9,SLAMF9,MIR4259,C1orf204,IGSF8,PEA15,PIGM
SE_02_127500240 chr1:159909523-159923300 Sample_02_1275 Prostate PC3_Vorinostat 240 20 364 17 1 95 552 TAGLN2,VSIG8,CFAP45,LINC01133,IGSF9,SLAMF9,MIR4259,C1orf204,DUSP23,PIGM
SE_02_059100127 chr1:159909668-159926257 Sample_02_0591 PBMCs adult CD4+CD25-CD45RA+CD27+ naive T cells 127 2 417 23 1 142 912 TAGLN2,VSIG8,CFAP45,LINC01133,IGSF9,SLAMF9,MIR4259,C1orf204
SE_02_130900418 chr1:159909934-159925990 Sample_02_1309 Artery Pulmonary artery endothelial cells_Control 418 4 403 22 1 134 912 TAGLN2,VSIG8,CFAP45,LINC01133,IGSF9,SLAMF9,MIR4259,C1orf204
SE_02_130800325 chr1:159909948-159925990 Sample_02_1308 Artery Pulmonary artery endothelial cells_caMEK5 325 4 403 22 1 134 912 TAGLN2,VSIG8,CFAP45,LINC01133,IGSF9,SLAMF9,MIR4259,C1orf204
SE_02_127700132 chr1:159910040-159921563 Sample_02_1277 Prostate PC3_COMBO 132 17 303 12 1 76 536 TAGLN2,VSIG8,CFAP45,LINC01133,IGSF9,SLAMF9,MIR4259,C1orf204,DUSP23,PIGM
SE_02_152901001 chr1:159917942-159926894 Sample_02_1529 Peripheral blood neutrophils_0BC75 1001 1 217 15 0 100 909 TAGLN2,CFAP45,LINC01133,IGSF9,SLAMF9,MIR4259,C1orf204,SLAMF8,PIGM
Genomic distribution of SEs associated with SLAMF9
Genome Browser

The strength of the tissue affected by the gene

Expression of SLAMF9

Cell line (ENCODE) Primary cell (ENCODE)Tissue (NCBI) Normal tissue (GTEx) Cell line (CCLE)