SEdb 2.0
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Gene overview

Strategies/Algorithm: lasso Ensembl ID: ENSG00000254415
Gene: SIGLEC14 Gene type: protein_coding
Strand: - External links:
Genomic region: chr19:51642553-51646801 Genome Browser:

Super-enhancer search result of gene-based

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SE ID SE Region Sample ID Tissue type Biosample name SE rank Element Common SNP eQTL Risk SNP TFBS CRISPR Cas9 Gene
SE_02_087500892 chr19:51540275-51550079 Sample_02_0875 Peripheral blood Peripheral blood-derived mast cells 892 1 310 29 3 0 0 SIGLEC6,LINC01530,ZNF175,SIGLEC12,SIGLEC14,CEACAM18,ETFB,SIGLEC8
SE_02_153000439 chr19:51606535-51655427 Sample_02_1530 Peripheral blood neutrophils_0BA0X 439 10 1343 181 5 0 1652 SIGLEC5,SIGLEC14,SPACA6P-AS,MIRLET7E,MIR99B,MIR125A,SPACA6P,LINC01530,ZNF175,FPR2,FPR1,HAS1
SE_02_092800397 chr19:51618917-51652892 Sample_02_0928 Peripheral blood neutrophils_Ecoli 397 11 918 112 4 0 1456 SIGLEC5,SIGLEC14,SPACA6P-AS,MIRLET7E,MIR99B,MIR125A,SPACA6P,LINC01530,ZNF175,FPR2,FPR1,HAS1
SE_02_152900926 chr19:51619072-51656412 Sample_02_1529 Peripheral blood neutrophils_0BC75 926 11 1030 145 4 0 1456 SIGLEC5,SIGLEC14,SPACA6P-AS,MIRLET7E,MIR99B,MIR125A,SPACA6P,LINC01530,ZNF175,FPR2,FPR1,HAS1
SE_01_010401065 chr19:51687526-51692564 Sample_01_0104 Lung upper lobe of left lung 1065 1 120 9 0 64 37 SPACA6P-AS,MIRLET7E,MIR99B,MIR125A,HAS1,SPACA6P,SIGLEC14,FPR2,SIGLEC10,SIGLEC6,SIGLEC5,SIGLEC12
SE_02_132100684 chr19:51687539-51691919 Sample_02_1321 Connective Tissue HT1080_FUS-DDIT3 684 1 102 7 0 64 0 SPACA6P-AS,MIRLET7E,MIR99B,MIR125A,HAS1,SPACA6P,SIGLEC14,FPR2,ZNF175
SE_02_132200687 chr19:51687573-51691804 Sample_02_1322 Connective Tissue HT1080_WT 687 1 95 4 0 64 0 SPACA6P-AS,MIRLET7E,MIR99B,MIR125A,HAS1,SPACA6P,SIGLEC14,FPR2,ZNF175
SE_02_132000434 chr19:51687575-51691829 Sample_02_1320 Connective Tissue HT1080_EWS-FLI1 434 1 98 6 0 64 0 SPACA6P-AS,MIRLET7E,MIR99B,MIR125A,HAS1,SPACA6P,SIGLEC14,FPR2,ZNF175
SE_02_093000900 chr19:51687619-51692635 Sample_02_0930 Mid-gestation placenta trophoblast__SynT 900 1 120 9 0 69 62 SPACA6P-AS,MIR99B,MIRLET7E,MIR125A,HAS1,SPACA6P,SIGLEC14,FPR1,FPR3,ZNF175,ZNF613
SE_02_095001227 chr19:51687624-51692444 Sample_02_0950 Umbilical vein HUVEC_WT 1227 1 113 9 0 64 4 SPACA6P-AS,MIRLET7E,MIR99B,MIR125A,HAS1,SPACA6P,SIGLEC14,ZNF836,ZNF577,FPR1,ZNF175,ZNF649
SE_02_094100711 chr19:51687652-51691990 Sample_02_0941 Brain T98G 711 1 103 7 0 64 0 SPACA6P-AS,MIRLET7E,MIR99B,MIR125A,HAS1,SPACA6P,SIGLEC14,FPR1,SIGLEC5,ZNF175
SE_02_083200519 chr19:51687681-51692036 Sample_02_0832 Umblical vein HUVECs_TNF30min 519 2 104 7 0 64 0 SPACA6P-AS,MIRLET7E,MIR99B,MIR125A,HAS1,SPACA6P,SIGLEC14,ZNF836,ZNF577,FPR1,ZNF175,ZNF649
SE_02_151900371 chr19:51687815-51692393 Sample_02_1519 Umbilical vein HUVEC_Scr_IL1beta 371 3 109 9 0 64 0 SPACA6P-AS,MIRLET7E,MIR99B,MIR125A,HAS1,SPACA6P,SIGLEC14,ZNF836,ZNF577,FPR1,ZNF175,ZNF649
SE_02_151800467 chr19:51687818-51691258 Sample_02_1518 Umbilical vein HUVEC_Scr 467 3 84 4 0 64 0 SPACA6P-AS,MIRLET7E,MIR99B,MIR125A,HAS1,SPACA6P,SIGLEC14,ZNF836,ZNF577,FPR1,ZNF175,ZNF649
SE_02_092901099 chr19:51687870-51692407 Sample_02_0929 Mid-gestation placenta trophoblast__CytT 1099 1 107 9 0 64 0 SPACA6P-AS,MIRLET7E,MIR99B,MIR125A,HAS1,SPACA6P,SIGLEC14,FPR1,FPR3,ZNF175,ZNF613
SE_02_131900205 chr19:51687912-51691896 Sample_02_1319 Connective Tissue HT1080_DDIT3 205 1 95 7 0 64 0 SPACA6P-AS,MIRLET7E,MIR99B,MIR125A,HAS1,SPACA6P,SIGLEC14,FPR2,ZNF175
SE_02_158200342 chr19:51724828-51745873 Sample_02_1582 Renal OS-RC-2 342 12 717 94 2 16 32 FPR1,SPACA6P-AS,MIRLET7E,MIR99B,MIR125A,HAS1,SPACA6P,FPR2,FPR3,SIGLEC14,ZNF577
SE_02_153000011 chr19:51727985-51783510 Sample_02_1530 Peripheral blood neutrophils_0BA0X 11 7 1644 212 5 0 697 FPR1,FPR2,SPACA6P-AS,MIRLET7E,MIR99B,MIR125A,HAS1,SPACA6P,FPR3,ZNF766,SIGLEC14,ZNF577,ZNF175,ZNF613,ZNF615
SE_02_092700053 chr19:51731753-51777985 Sample_02_0927 Peripheral blood neutrophils_US 53 10 1380 165 5 0 697 FPR1,FPR2,SPACA6P-AS,MIRLET7E,MIR99B,MIR125A,HAS1,SPACA6P,FPR3,ZNF766,SIGLEC14,ZNF577,ZNF175,ZNF613,ZNF615
SE_02_153100007 chr19:51732222-51778566 Sample_02_1531 Peripheral blood neutrophils_0B9ZK 7 11 1373 165 5 0 697 FPR1,FPR2,SPACA6P-AS,MIRLET7E,MIR99B,MIR125A,HAS1,SPACA6P,FPR3,ZNF766,SIGLEC14,ZNF577,ZNF175,ZNF613,ZNF615
SE_02_152900921 chr19:51733175-51741306 Sample_02_1529 Peripheral blood neutrophils_0BC75 921 1 259 38 1 0 0 SPACA6P-AS,MIRLET7E,MIR99B,MIR125A,HAS1,FPR1,SPACA6P,FPR2,ZNF766,SIGLEC14,ZNF577,FPR3,ZNF175,ZNF613,ZNF615
SE_02_092800388 chr19:51741658-51756358 Sample_02_0928 Peripheral blood neutrophils_Ecoli 388 1 474 53 2 0 344 FPR1,SPACA6P-AS,MIRLET7E,MIR99B,MIR125A,HAS1,SPACA6P,FPR2,FPR3,SIGLEC14,ZNF577,ZNF175,ZNF613,ZNF615
SE_02_152900516 chr19:51744203-51757085 Sample_02_1529 Peripheral blood neutrophils_0BC75 516 1 411 46 2 0 344 FPR1,FPR2,HAS1,FPR3,SIGLEC14,ZNF577,ZNF175,ZNF613,ZNF615
Genomic distribution of SEs associated with SIGLEC14
Genome Browser

The strength of the tissue affected by the gene

Expression of SIGLEC14

Cell line (ENCODE) Primary cell (ENCODE)Tissue (NCBI) Normal tissue (GTEx) Cell line (CCLE)