SEdb 2.0
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  2. Super-enhancer search result of gene-based

Gene overview

Strategies/Algorithm: lasso Ensembl ID: ENSG00000063015
Gene: SEZ6 Gene type: protein_coding
Strand: - External links:
Genomic region: chr17:28954901-29006440 Genome Browser:

Super-enhancer search result of gene-based

GREAT Download bed
SE ID SE Region Sample ID Tissue type Biosample name SE rank Element Common SNP eQTL Risk SNP TFBS CRISPR Cas9 Gene
SE_02_116000073 chr17:28740266-28773881 Sample_02_1160 Embryo H1_shLuc 73 7 822 59 13 323 2257 FAM222B,TRAF4,NEK8,SNORD4B,RAB34,TLCD1,PROCA1,SNORD42A,SNORD4A,SNORD42B,RPL23A,SEZ6
SE_02_116000657 chr17:28948882-28968890 Sample_02_1160 Embryo H1_shLuc 657 3 514 38 3 287 1681 SEZ6,PHF12,LOC101927018,DHRS13,PIPOX
SE_02_101700924 chr17:29007963-29064075 Sample_02_1017 Embryo H9_Mesendoderm 24h_Hydroxyurea 924 15 1549 123 0 499 870 PIPOX,SEZ6,TIAF1
SE_02_101600996 chr17:29016006-29049404 Sample_02_1016 Embryo H9_Mesendoderm_24h 996 9 936 82 0 274 245 PIPOX,SEZ6,TIAF1
SE_02_116100117 chr17:29016574-29048911 Sample_02_1161 Embryo H1_shZNF587 117 9 899 79 0 269 245 PIPOX,SEZ6,TIAF1
SE_02_117200685 chr17:29016760-29040609 Sample_02_1172 Embryo H9 WT 685 6 677 62 0 184 0 SEZ6,TIAF1,PIPOX
SE_02_067700339 chr17:29016787-29040225 Sample_02_0677 Embryo H1 hESC-derived neural progenitor cells_Smad_6hr 339 6 664 60 0 184 0 SEZ6,TIAF1,PIPOX,CRYBA1,PHF12
SE_02_067500100 chr17:29018584-29048952 Sample_02_0675 Embryo H1 hESC-derived neural progenitor cells_Smad_0hr 100 12 835 72 0 250 245 PIPOX,SEZ6,TIAF1,CRYBA1,PHF12
SE_02_068000106 chr17:29018627-29040459 Sample_02_0680 Embryo H1 hESC-derived neural progenitor cells_Smad_48hr 106 17 612 54 0 177 0 SEZ6,TIAF1,PIPOX,CRYBA1,PHF12
SE_02_068100172 chr17:29018907-29040183 Sample_02_0681 Embryo H1 hESC-derived neural progenitor cells_Smad_72hr 172 9 595 52 0 177 0 SEZ6,TIAF1,PIPOX,CRYBA1,PHF12
SE_02_067900340 chr17:29019791-29040130 Sample_02_0679 Embryo H1 hESC-derived neural progenitor cells_Smad_24hr 340 9 579 50 0 175 0 SEZ6,TIAF1,PIPOX,CRYBA1,PHF12
SE_02_116000064 chr17:29091314-29161819 Sample_02_1160 Embryo H1_shLuc 64 16 1786 120 10 527 3174 MYO18A,TIAF1,PIPOX,SEZ6
Genomic distribution of SEs associated with SEZ6
Genome Browser

The strength of the tissue affected by the gene

Expression of SEZ6

Cell line (ENCODE) Primary cell (ENCODE)Tissue (NCBI) Normal tissue (GTEx) Cell line (CCLE)