SEdb 2.0
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Gene overview

Strategies/Algorithm: lasso Ensembl ID: ENSG00000180900
Gene: SCRIB Gene type: protein_coding
Strand: - External links:
Genomic region: chr8:143790920-143815773 Genome Browser:

Super-enhancer search result of gene-based

GREAT Download bed
SE ID SE Region Sample ID Tissue type Biosample name SE rank Element Common SNP eQTL Risk SNP TFBS CRISPR Cas9 Gene
SE_02_115900484 chr8:143871307-143887276 Sample_02_1159 Mammary gland MCF7 484 3 562 39 1 76 513 EPPK1,MIR6845,PUF60,NRBP2,SCRIB,PLEC
SE_02_066500198 chr8:143873315-143886153 Sample_02_0665 Prostate RWPE1 Schlap1 rep1 198 4 421 29 1 35 31 EPPK1,MIR6845,PUF60,NRBP2,PLEC,SCRIB,EXOSC4,PARP10
SE_02_066600417 chr8:143873359-143888942 Sample_02_0666 Prostate RWPE1 Lacz rep1 417 5 534 34 1 38 17 EPPK1,MIR6845,PUF60,NRBP2,PLEC,SCRIB,EXOSC4,PARP10
SE_02_122900175 chr8:143898534-143972411 Sample_02_1229 Haematopoietic and lymphoid tissue bone marrow K562_Control 175 26 2832 246 29 676 5910 PLEC,MIR661,EPPK1,PARP10,GRINA,SPATC1,PUF60,SCRIB,FAM83H,NRBP2
SE_02_132000003 chr8:143926623-143957056 Sample_02_1320 Connective Tissue HT1080_EWS-FLI1 3 7 1138 107 3 341 3611 PLEC,MIR661,EPPK1,PARP10,GRINA,PUF60,SCRIB,SPATC1
SE_02_046100181 chr8:143927655-143956965 Sample_02_0461 Blood MV-4-11-B cells 181 10 1066 94 3 322 3387 PLEC,MIR661,EPPK1,PARP10,GRINA,TSTA3,ZNF623,SCRIB,OPLAH,EXOSC4,MAPK15,NRBP2,FAM83H,SPATC1
SE_02_132200010 chr8:143927704-143953918 Sample_02_1322 Connective Tissue HT1080_WT 10 4 982 84 3 318 3307 PLEC,MIR661,EPPK1,PARP10,GRINA,PUF60,SCRIB,SPATC1
SE_02_076900102 chr8:143928004-143957141 Sample_02_0769 Ovary HEYA8 102 12 1059 94 3 320 3290 PLEC,MIR661,EPPK1,PARP10,GRINA,CYC1,SCRIB,MAF1,PUF60,NRBP2,SPATC1
SE_02_132100078 chr8:143928118-143953843 Sample_02_1321 Connective Tissue HT1080_FUS-DDIT3 78 6 960 81 3 316 3166 PLEC,MIR661,EPPK1,PARP10,GRINA,PUF60,SCRIB,SPATC1
SE_02_093600177 chr8:143928148-143973452 Sample_02_0936 Retinal Pigmented Epithelial RPE188_TnT 177 11 1491 139 6 348 3310 PLEC,MIR661,EPPK1,PARP10,GRINA,SPATC1,PUF60,CYC1,GPAA1,ZNF623,SCRIB,OPLAH,EXOSC4,SCRT1,MAF1,NRBP2,FAM83H
SE_02_093800233 chr8:143928160-143957733 Sample_02_0938 Retinal Pigmented Epithelial RPE190_TnT 233 6 1068 93 3 320 3249 PLEC,MIR661,EPPK1,PARP10,GRINA,PUF60,CYC1,GPAA1,ZNF623,SCRIB,OPLAH,EXOSC4,SCRT1,MAF1,NRBP2,FAM83H
SE_02_077100211 chr8:143928218-143972028 Sample_02_0771 Ovary OVCA429_shGRHL2 211 12 1448 134 6 329 3249 PLEC,MIR661,EPPK1,PARP10,GRINA,SPATC1,CYC1,SCRIB,MAF1,PUF60,NRBP2
SE_02_058400026 chr8:143928295-143955922 Sample_02_0584 Lung H1299 WT 26 3 1019 86 3 320 3249 PLEC,MIR661,EPPK1,PARP10,GRINA,PUF60,NAPRT,TSTA3,GPAA1,SCRIB,EXOSC4,ZNF707,NRBP2,FAM83H,SPATC1
SE_02_093500029 chr8:143928340-143958176 Sample_02_0935 Retinal Pigmented Epithelial RPE188_Con 29 5 1075 95 3 320 3249 PLEC,MIR661,EPPK1,PARP10,GRINA,PUF60,CYC1,GPAA1,ZNF623,SCRIB,OPLAH,EXOSC4,SCRT1,MAF1,NRBP2,FAM83H
SE_02_058500665 chr8:143928465-143957483 Sample_02_0585 Umbilical vein HUVEC 0hour 665 9 1053 90 3 320 3249 PLEC,MIR661,PARP10,GRINA,PUF60,CYC1,GPAA1,SCRIB,OPLAH,EXOSC4,GSDMD,SHARPIN,EPPK1,MAF1,NRBP2,SPATC1
SE_02_095000144 chr8:143928518-143957708 Sample_02_0950 Umbilical vein HUVEC_WT 144 8 1057 91 3 320 3249 PLEC,MIR661,PARP10,GRINA,PUF60,CYC1,GPAA1,SCRIB,OPLAH,EXOSC4,GSDMD,SHARPIN,EPPK1,MAF1,NRBP2,SPATC1
SE_02_077000215 chr8:143931506-143973120 Sample_02_0770 Ovary OVCA429_shLuc 215 14 1340 125 5 301 2735 PLEC,MIR661,PARP10,GRINA,SPATC1,CYC1,SCRIB,MAF1,PUF60,NRBP2
SE_02_076600176 chr8:143931665-143956830 Sample_02_0766 Ovary PEO1 176 9 892 78 2 280 2694 PLEC,MIR661,PARP10,GRINA,CYC1,SCRIB,MAF1,PUF60,NRBP2,SPATC1
SE_02_113900165 chr8:143933193-143957671 Sample_02_1139 Retinal Pigmented Epithelial RPE1-anaphase/telophase 165 5 842 76 2 259 2296 PLEC,MIR661,PARP10,GRINA,PUF60,CYC1,GPAA1,ZNF623,SCRIB,OPLAH,EXOSC4,EPPK1,SCRT1,MAF1,NRBP2,FAM83H
SE_02_146900112 chr8:143933402-143957533 Sample_02_1469 Umbilical Vein HUVEC 112 3 824 74 2 253 2252 PLEC,MIR661,PARP10,GRINA,PUF60,CYC1,GPAA1,SCRIB,OPLAH,EXOSC4,GSDMD,SHARPIN,EPPK1,MAF1,NRBP2,SPATC1
SE_02_151800035 chr8:143933413-143957297 Sample_02_1518 Umbilical vein HUVEC_Scr 35 4 817 74 2 253 2249 PLEC,MIR661,PARP10,GRINA,PUF60,CYC1,GPAA1,SCRIB,OPLAH,EXOSC4,GSDMD,SHARPIN,EPPK1,MAF1,NRBP2,SPATC1
SE_02_113800274 chr8:143933446-143974172 Sample_02_1138 Retinal Pigmented Epithelial RPE1-prometaphase 274 6 1257 121 5 285 2396 PLEC,MIR661,PARP10,GRINA,SPATC1,PUF60,CYC1,GPAA1,ZNF623,SCRIB,OPLAH,EXOSC4,EPPK1,SCRT1,MAF1,NRBP2,FAM83H
SE_02_083100094 chr8:143933516-143957508 Sample_02_0831 Umblical vein HUVECs_TNF0min 94 9 821 74 2 253 2216 PLEC,MIR661,PARP10,GRINA,PUF60,CYC1,GPAA1,SCRIB,OPLAH,EXOSC4,GSDMD,SHARPIN,EPPK1,MAF1,NRBP2,SPATC1
SE_02_108500187 chr8:143933535-143957023 Sample_02_1085 Retinal Pigmented Epithelial hTERT-RPE1 187 8 802 73 2 253 2215 PLEC,MIR661,PARP10,GRINA,PUF60,CYC1,GPAA1,ZNF623,SCRIB,OPLAH,EXOSC4,EPPK1,SCRT1,MAF1,NRBP2,FAM83H
SE_02_152000029 chr8:143933597-143957181 Sample_02_1520 Umbilical vein HUVEC_Notch1kd_IL1beta 29 7 805 74 2 253 2215 PLEC,MIR661,PARP10,GRINA,PUF60,CYC1,GPAA1,SCRIB,OPLAH,EXOSC4,GSDMD,SHARPIN,EPPK1,MAF1,NRBP2,SPATC1
SE_02_083200110 chr8:143933954-143957371 Sample_02_0832 Umblical vein HUVECs_TNF30min 110 7 804 72 2 250 2164 PLEC,MIR661,PARP10,GRINA,PUF60,CYC1,GPAA1,SCRIB,OPLAH,EXOSC4,GSDMD,SHARPIN,EPPK1,MAF1,NRBP2,SPATC1
SE_02_113200203 chr8:143934011-143957337 Sample_02_1132 Pancreas KLM1 wt 203 6 795 72 2 250 2143 PLEC,MIR661,PARP10,GRINA,PUF60,CYC1,SCRIB,OPLAH,EXOSC4,EPPK1,MAF1,ZNF707,NRBP2
SE_02_094100004 chr8:143934181-143971410 Sample_02_0941 Brain T98G 4 9 1162 112 5 251 2108 PLEC,MIR661,PARP10,GRINA,SPATC1,GPAA1,SCRIB,OPLAH,EXOSC4
SE_02_113700865 chr8:143934357-143957754 Sample_02_1137 Retinal Pigmented Epithelial RPE1-interphase 865 9 782 71 2 235 2052 PLEC,MIR661,PARP10,GRINA,PUF60,CYC1,GPAA1,ZNF623,SCRIB,OPLAH,EXOSC4,EPPK1,SCRT1,MAF1,NRBP2,FAM83H
SE_02_066600060 chr8:143934433-143958428 Sample_02_0666 Prostate RWPE1 Lacz rep1 60 9 797 74 2 227 2034 PLEC,MIR661,PARP10,GRINA,PUF60,CYC1,GPAA1,SCRIB,OPLAH,EXOSC4,SHARPIN,EPPK1,MAF1,NRBP2
SE_02_093700515 chr8:143935300-143963747 Sample_02_0937 Retinal Pigmented Epithelial RPE190_Con 515 5 896 86 4 209 1803 PLEC,MIR661,PARP10,GRINA,SPATC1,PUF60,CYC1,GPAA1,ZNF623,SCRIB,OPLAH,EXOSC4,EPPK1,SCRT1,MAF1,NRBP2,FAM83H
SE_02_076700258 chr8:143935453-143971560 Sample_02_0767 Ovary OVCA429 258 12 1106 105 4 211 1769 PLEC,MIR661,PARP10,GRINA,SPATC1,CYC1,SCRIB,MAF1,PUF60,NRBP2
SE_02_043700069 chr8:143935998-143956987 Sample_02_0437 Bone 143B 69 7 690 62 1 205 1672 PLEC,MIR661,PARP10,GRINA,PUF60,GPAA1,SCRIB,OPLAH,EXOSC4,SHARPIN,NRBP2,SPATC1
SE_02_066500045 chr8:143936031-143957903 Sample_02_0665 Prostate RWPE1 Schlap1 rep1 45 4 716 65 1 205 1669 PLEC,MIR661,PARP10,GRINA,PUF60,CYC1,GPAA1,SCRIB,OPLAH,EXOSC4,SHARPIN,EPPK1,MAF1,NRBP2
Genomic distribution of SEs associated with SCRIB
Genome Browser

The strength of the tissue affected by the gene

Expression of SCRIB

Cell line (ENCODE) Primary cell (ENCODE)Tissue (NCBI) Normal tissue (GTEx) Cell line (CCLE)