SEdb 2.0
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Gene overview

Strategies/Algorithm: lasso Ensembl ID: ENSG00000129465
Gene: RIPK3 Gene type: protein_coding
Strand: - External links:
Genomic region: chr14:24336025-24340022 Genome Browser:

Super-enhancer search result of gene-based

GREAT Download bed
SE ID SE Region Sample ID Tissue type Biosample name SE rank Element Common SNP eQTL Risk SNP TFBS CRISPR Cas9 Gene
SE_02_048000995 chr14:24252818-24297690 Sample_02_0480 Gingival epithelial HGEP 995 8 1277 134 5 266 3310 DHRS1,TGM1,RABGGTA,TSSK4,LTB4R,LTB4R2,MDP1,GMPR2,CHMP4A,RIPK3,CIDEB,NOP9,NEDD8,TINF2,ADCY4,REC8,NFATC4,PSME1,PSME2,EMC9,IPO4,NYNRIN,DCAF11
SE_00_003900292 chr14:24428819-24443557 Sample_00_0039 Spleen spleen_3y 292 3 415 101 2 148 2169 SDR39U1,CBLN3,KHNYN,NYNRIN,ADCY4,CIDEB,CA1,LTB4R,RIPK3,RP11-80A15.1,RP11-934B9.3
SE_00_004000260 chr14:24428921-24443265 Sample_00_0040 Spleen spleen_30y 260 4 409 96 2 142 2126 SDR39U1,CBLN3,KHNYN,NYNRIN,ADCY4,CIDEB,CA1,LTB4R,RIPK3,RP11-80A15.1,RP11-934B9.3
SE_02_087500074 chr14:24498118-24577832 Sample_02_0875 Peripheral blood Peripheral blood-derived mast cells 74 22 2450 319 3 51 996 CTSG,CMA1,LOC101927045,GZMH,CBLN3,REC8,NFATC4,KHNYN,SDR39U1,RIPK3,TINF2,CIDEB,NYNRIN
Genomic distribution of SEs associated with RIPK3
Genome Browser

The strength of the tissue affected by the gene

Expression of RIPK3

Cell line (ENCODE) Primary cell (ENCODE)Tissue (NCBI) Normal tissue (GTEx) Cell line (CCLE)