Gene overview
| Strategies/Algorithm: | lasso | Ensembl ID: | ENSG00000081237 |
| Gene: | PTPRC | Gene type: | protein_coding |
| Strand: | + | External links: |
|
| Genomic region: | chr1:198638457-198757476 | Genome Browser: |   |
Super-enhancer search result of gene-based
| SE ID | SE Region | Sample ID | Tissue type | Biosample name | SE rank | Element | Common SNP | eQTL | Risk SNP | TFBS | CRISPR Cas9 | Gene |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| SE_02_092700212 | chr1:198601650-198686834 |
Sample_02_0927 | Peripheral blood | neutrophils_US | 212 | 21 | 2196 | 64 | 11 | 189 | 50 | PTPRC |
| SE_02_092800174 | chr1:198601907-198694305 |
Sample_02_0928 | Peripheral blood | neutrophils_Ecoli | 174 | 20 | 2387 | 71 | 14 | 193 | 125 | PTPRC |
| SE_02_152900321 | chr1:198602119-198686162 |
Sample_02_1529 | Peripheral blood | neutrophils_0BC75 | 321 | 20 | 2168 | 64 | 11 | 185 | 50 | PTPRC |
| SE_02_153000461 | chr1:198602124-198686014 |
Sample_02_1530 | Peripheral blood | neutrophils_0BA0X | 461 | 13 | 2162 | 64 | 11 | 182 | 50 | PTPRC |
| SE_02_153100176 | chr1:198612660-198685511 |
Sample_02_1531 | Peripheral blood | neutrophils_0B9ZK | 176 | 14 | 1871 | 60 | 10 | 138 | 50 | PTPRC |
| SE_02_121800449 | chr1:198619401-198685094 |
Sample_02_1218 | Bone marrow | Daudi | 449 | 39 | 1674 | 57 | 10 | 135 | 50 | PTPRC |
| SE_02_122500106 | chr1:198620214-198685843 |
Sample_02_1225 | Bone marrow | RAJI | 106 | 34 | 1670 | 57 | 10 | 136 | 50 | PTPRC |
| SE_02_059300153 | chr1:198638418-198683118 |
Sample_02_0593 | Fetal spleenocytes | fetal naive T cells | 153 | 12 | 1071 | 37 | 4 | 120 | 50 | PTPRC |
| SE_02_077000684 | chr1:198651530-198686150 |
Sample_02_0770 | Ovary | OVCA429_shLuc | 684 | 19 | 825 | 27 | 2 | 79 | 0 | PTPRC,ATP6V1G3 |
| SE_02_076700531 | chr1:198653904-198685071 |
Sample_02_0767 | Ovary | OVCA429 | 531 | 25 | 744 | 24 | 2 | 64 | 0 | PTPRC,ATP6V1G3 |
| SE_02_060500315 | chr1:198654149-198686281 |
Sample_02_0605 | Skin | Skin Fibroblast_DMSO | 315 | 9 | 765 | 24 | 2 | 75 | 0 | PTPRC,ATP6V1G3 |
| SE_02_060600340 | chr1:198654740-198686265 |
Sample_02_0606 | Skin | Skin Fibroblast_Nutlin3A | 340 | 9 | 746 | 24 | 2 | 67 | 0 | PTPRC,ATP6V1G3 |
| SE_02_077100940 | chr1:198655362-198686005 |
Sample_02_0771 | Ovary | OVCA429_shGRHL2 | 940 | 20 | 723 | 23 | 2 | 60 | 0 | PTPRC,MIR181A1HG |
| SE_02_062200703 | chr1:198655619-198695807 |
Sample_02_0622 | Blood | EOL1_Naive | 703 | 13 | 963 | 31 | 5 | 74 | 170 | PTPRC |
Genomic distribution of SEs associated with PTPRC