SEdb 2.0
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Gene overview

Strategies/Algorithm: lasso Ensembl ID: ENSG00000158615
Gene: PPP1R15B Gene type: protein_coding
Strand: - External links:
Genomic region: chr1:204403381-204411817 Genome Browser:

Super-enhancer search result of gene-based

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SE ID SE Region Sample ID Tissue type Biosample name SE rank Element Common SNP eQTL Risk SNP TFBS CRISPR Cas9 Gene
SE_00_005600230 chr1:204253995-204363880 Sample_00_0056 Sigmoid colon sigmoid colon 3y 230 43 3011 263 12 447 1234 PLEKHA6,GOLT1A,PPP1R15B,LINC00628
SE_02_093000319 chr1:204286882-204323963 Sample_02_0930 Mid-gestation placenta trophoblast__SynT 319 20 963 109 5 105 0 PLEKHA6,LINC00628,REN,PIK3C2B,PPP1R15B,KISS1
SE_02_092900444 chr1:204286966-204321275 Sample_02_0929 Mid-gestation placenta trophoblast__CytT 444 15 902 104 5 98 0 PLEKHA6,LINC00628,REN,PIK3C2B,PPP1R15B,KISS1,GOLT1A
SE_02_098900123 chr1:204376856-204508517 Sample_02_0989 Kidney kidney cortex_WT 123 33 3518 254 15 527 4454 PPP1R15B,PIK3C2B,MDM4,PLEKHA6,LINC00628,LRRN2
SE_00_005601031 chr1:204376957-204419071 Sample_00_0056 Sigmoid colon sigmoid colon 3y 1031 14 1009 39 5 129 709 PPP1R15B,PLEKHA6,LINC00628,PIK3C2B,REN
SE_02_103300566 chr1:204398817-204417634 Sample_02_1033 Haematopoietic and lymphoid tissue bone marrow K562 566 5 437 10 1 85 709 PPP1R15B,PLEKHA6,LINC00628,MDM4
SE_02_152300414 chr1:204406841-204423390 Sample_02_1523 Lung A549 DMSO 414 7 375 16 3 53 579 PPP1R15B,PIK3C2B,PLEKHA6,LINC00628,MDM4
SE_02_094900086 chr1:204407642-204511797 Sample_02_0949 Umbilical artery HUAEC_WT 86 39 2843 226 11 439 4186 PPP1R15B,PIK3C2B,MDM4,PLEKHA6,LINC00628
SE_02_111400300 chr1:204407937-204420641 Sample_02_1114 Embryonic kidney HEK293 300 7 291 10 2 44 441 PPP1R15B,PLEKHA6,LINC00628,MDM4
SE_04_000900498 chr1:204408175-204452192 Sample_04_0009 Lung A549 498 9 1144 96 3 239 2612 PPP1R15B,PIK3C2B,PLEKHA6,LINC00628,MDM4
SE_02_060501302 chr1:204408905-204423259 Sample_02_0605 Skin Skin Fibroblast_DMSO 1302 5 330 15 3 45 558 PPP1R15B,PIK3C2B,PLEKHA6,LINC00628,MDM4
SE_04_000800099 chr1:204409418-204452006 Sample_04_0008 Lung A549 shRNA control 99 11 1109 93 3 238 2594 PPP1R15B,PIK3C2B,PLEKHA6,LINC00628,MDM4
SE_02_158200462 chr1:204409506-204439318 Sample_02_1582 Renal OS-RC-2 462 8 741 53 3 133 1718 PPP1R15B,PIK3C2B,PLEKHA6,LINC00628
SE_04_000700127 chr1:204409566-204451547 Sample_04_0007 Lung A549 FOXA2 shRNA2 127 12 1094 92 3 236 2587 PPP1R15B,PIK3C2B,PLEKHA6,LINC00628,MDM4
SE_04_000600167 chr1:204409806-204452440 Sample_04_0006 Lung A549 GFP control 167 9 1110 97 3 233 2553 PPP1R15B,PIK3C2B,PLEKHA6,LINC00628,MDM4
SE_02_073900081 chr1:204448248-204529466 Sample_02_0739 Blood Nalm6 81 11 2305 196 10 251 1994 MDM4,PIK3C2B,PPP1R15B
SE_02_142900156 chr1:204448814-204546208 Sample_02_1429 Blood GM12878_WT 156 29 2756 225 14 298 2243 MDM4,PIK3C2B,PPP1R15B
SE_02_087500529 chr1:204457038-204470687 Sample_02_0875 Peripheral blood Peripheral blood-derived mast cells 529 1 471 34 1 117 957 PIK3C2B,MDM4,PPP1R15B,PLEKHA6
SE_02_088500057 chr1:204460110-204531675 Sample_02_0885 Blood NALM6_2 57 18 1967 158 9 178 1296 MDM4,PIK3C2B,PPP1R15B
SE_02_057300057 chr1:204460997-204529720 Sample_02_0573 Blood Nalm6_1 57 17 1891 154 8 162 1120 MDM4,PIK3C2B,PPP1R15B
SE_02_109900367 chr1:204481340-204519835 Sample_02_1099 Haematopoietic and lymphoid tissue bone marrow K562_DMSO_noIFNG 367 7 1008 85 4 40 490 MDM4,PIK3C2B,PPP1R15B
SE_02_098700277 chr1:204481511-204523853 Sample_02_0987 Blood K562_Control_1 277 8 1135 101 5 40 490 MDM4,PIK3C2B,PPP1R15B
SE_02_098800388 chr1:204493149-204520955 Sample_02_0988 Blood K562_EPZ 388 8 757 59 3 31 381 MDM4,PIK3C2B,PPP1R15B
SE_02_122900692 chr1:204493915-204537566 Sample_02_1229 Haematopoietic and lymphoid tissue bone marrow K562_Control 692 14 1228 103 6 60 602 MDM4,PIK3C2B,PPP1R15B
SE_02_113000523 chr1:204494086-204524956 Sample_02_1130 Haematopoietic and lymphoid tissue bone marrow K562_??Np63?? expressing 523 7 877 72 3 23 381 MDM4,PIK3C2B,PPP1R15B
SE_04_000100758 chr1:204494131-204521332 Sample_04_0001 Blood heat shocked K562 758 4 743 57 3 23 381 MDM4,PIK3C2B,PPP1R15B
SE_04_000200880 chr1:204494292-204525263 Sample_04_0002 Blood cold shocked K562 880 4 874 74 3 24 367 MDM4,PIK3C2B,PPP1R15B
SE_02_054500437 chr1:204494393-204521032 Sample_02_0545 Bone marrow K562 WT 437 5 731 57 3 23 332 MDM4,PIK3C2B,PPP1R15B
SE_02_111600724 chr1:204505835-204519775 Sample_02_1116 Haematopoietic and lymphoid tissue bone marrow K562_native 724 2 423 32 0 7 205 MDM4,PIK3C2B,PPP1R15B
SE_01_003900324 chr1:204505849-204519547 Sample_01_0039 Haematopoietic and lymphoid tissue bone marrow K562 324 2 412 31 0 7 205 MDM4,PIK3C2B,D4,PPP1R15B
Genomic distribution of SEs associated with PPP1R15B
Genome Browser

The strength of the tissue affected by the gene

Expression of PPP1R15B

Cell line (ENCODE) Primary cell (ENCODE)Tissue (NCBI) Normal tissue (GTEx) Cell line (CCLE)