SEdb 2.0
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Gene overview

Strategies/Algorithm: lasso Ensembl ID: ENSG00000130943
Gene: PKDREJ Gene type: protein_coding
Strand: - External links:
Genomic region: chr22:46255663-46263343 Genome Browser:

Super-enhancer search result of gene-based

GREAT Download bed
SE ID SE Region Sample ID Tissue type Biosample name SE rank Element Common SNP eQTL Risk SNP TFBS CRISPR Cas9 Gene
SE_02_087800135 chr22:46071370-46090031 Sample_02_0878 Ovary SVOG3e cells_noDox_control 135 1 606 17 1 116 131 MIRLET7BHG,PRR34,MIR3619,LINC00899,PRR34-AS1,MIRLET7A3,MIR4763,MIRLET7B,PKDREJ,WNT7B
SE_02_087900219 chr22:46071373-46089788 Sample_02_0879 Ovary SVOG3e cells_Dox_12h_control 219 1 595 17 1 116 131 MIRLET7BHG,PRR34,MIR3619,LINC00899,PRR34-AS1,MIRLET7A3,MIR4763,MIRLET7B,PKDREJ,WNT7B
SE_02_088200092 chr22:46071373-46089851 Sample_02_0882 Ovary SVOG3e_cells_noDox_transduced with V5-FOXL2 C134W 92 1 597 17 1 116 131 MIRLET7BHG,PRR34,MIR3619,LINC00899,PRR34-AS1,MIRLET7A3,MIR4763,MIRLET7B,PKDREJ,WNT7B
SE_02_088000098 chr22:46071374-46089838 Sample_02_0880 Ovary SVOG3e cells_noDox_transduced_V5-FOXL2_WT 98 1 597 17 1 116 131 MIRLET7BHG,PRR34,MIR3619,LINC00899,PRR34-AS1,MIRLET7A3,MIR4763,MIRLET7B,PKDREJ,WNT7B
SE_02_088300164 chr22:46071374-46090038 Sample_02_0883 Ovary SVOG3e_cells_Dox_12h_transduced with V5-FOXL2 C134W 164 1 606 17 1 117 131 MIRLET7BHG,PRR34,MIR3619,LINC00899,PRR34-AS1,MIRLET7A3,MIR4763,MIRLET7B,PKDREJ,WNT7B
SE_02_088100166 chr22:46071374-46090693 Sample_02_0881 Ovary SVOG3e cells_Dox_12h_transduced_V5-FOXL2_WT 166 1 634 17 1 120 131 MIRLET7BHG,PRR34,MIR3619,LINC00899,PRR34-AS1,MIRLET7A3,MIR4763,MIRLET7B,PKDREJ,WNT7B
SE_01_011500350 chr22:46072057-46082842 Sample_01_0115 Skeletal Muscle myotube originated from skeletal muscle myoblast 350 1 327 11 1 69 0 PRR34,MIR3619,LINC00899,PRR34-AS1,MIRLET7BHG,MIRLET7A3,MIR4763,MIRLET7B,PKDREJ,TTC38,WNT7B,CDPF1
SE_02_047800057 chr22:46147700-46205392 Sample_02_0478 Colon normal colon mucosa 57 11 1759 104 3 99 734 PPARA,MIRLET7A3,CDPF1,MIR4763,MIRLET7B,TTC38,PKDREJ
SE_02_101700931 chr22:46322182-46391399 Sample_02_1017 Embryo H9_Mesendoderm 24h_Hydroxyurea 931 14 2814 339 9 193 4965 CELSR1,TRMU,GTSE1,GTSE1-AS1,PKDREJ
SE_02_089300825 chr22:46334833-46354427 Sample_02_0893 Heart left ventricle_LV1226 825 4 742 80 1 44 735 TRMU,GTSE1,GTSE1-AS1,TTC38,PKDREJ
SE_00_002100769 chr22:46334898-46355184 Sample_00_0021 Lung lung_3y 769 3 772 87 1 44 750 TRMU,GTSE1,CN5H6.4,PKDREJ,TRU,TTC38
SE_02_088901309 chr22:46334989-46355174 Sample_02_0889 Heart left ventricle_LV1183 1309 9 771 87 1 44 750 TRMU,GTSE1,GTSE1-AS1,TTC38,PKDREJ
SE_02_089201176 chr22:46335107-46355061 Sample_02_0892 Heart left ventricle_LV1215 1176 8 762 86 1 44 750 TRMU,GTSE1,GTSE1-AS1,TTC38,PKDREJ
SE_01_010100455 chr22:46345697-46391491 Sample_01_0101 Pancreas pancreas_54y 455 10 2040 243 6 159 3662 CELSR1,TRMU,GTSE1,GTSE1-AS1,PKDREJ
SE_02_077501618 chr22:46353406-46389910 Sample_02_0775 Pancreas EndoC-BH1_SE 1618 12 1644 201 4 137 3221 CELSR1,TRMU,PKDREJ
Genomic distribution of SEs associated with PKDREJ
Genome Browser

The strength of the tissue affected by the gene

Expression of PKDREJ

Cell line (ENCODE) Primary cell (ENCODE)Tissue (NCBI) Normal tissue (GTEx) Cell line (CCLE)