SEdb 2.0
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Gene overview

Strategies/Algorithm: lasso Ensembl ID: ENSG00000162896
Gene: PIGR Gene type: protein_coding
Strand: - External links:
Genomic region: chr1:206928522-206946466 Genome Browser:

Super-enhancer search result of gene-based

GREAT Download bed
SE ID SE Region Sample ID Tissue type Biosample name SE rank Element Common SNP eQTL Risk SNP TFBS CRISPR Cas9 Gene
SE_00_005500933 chr1:206890297-206931627 Sample_00_0055 Spleen spleen 34y 933 7 1107 72 16 81 1874 PIGR,IL24,FCMR,IL20,FCAMR,IL10,C1orf116,YOD1,MAPKAPK2
SE_02_142900793 chr1:206905813-206932180 Sample_02_1429 Blood GM12878_WT 793 7 695 36 4 37 1151 PIGR,FCMR,IL20,FCAMR,IL24,IL19
SE_02_059100568 chr1:206906700-206930534 Sample_02_0591 PBMCs adult CD4+CD25-CD45RA+CD27+ naive T cells 568 9 621 31 3 37 1013 PIGR,FCMR,IL20,FCAMR,IL24
SE_02_077501666 chr1:207040999-207060221 Sample_02_0775 Pancreas EndoC-BH1_SE 1666 6 470 17 1 102 956 PFKFB2,YOD1,C4BPB,C1ORF116,C4BPA,PIGR,C1orf116
SE_02_151300762 chr1:207049274-207055344 Sample_02_1513 Lung Transitional AT2->1 cells 762 1 147 6 0 52 522 PFKFB2,YOD1,C4BPB,C1ORF116,C4BPA,PIGR,C1orf116
SE_02_153300189 chr1:207050110-207077652 Sample_02_1533 Lung purified primary alveolar epithelial type 2 cells 189 9 664 38 1 140 1857 PFKFB2,YOD1,C4BPB,C1ORF116,C4BPA,PIGR,C1orf116
SE_02_151200184 chr1:207050158-207077468 Sample_02_1512 Lung Purified AT2 cells 184 11 660 38 1 137 1825 PFKFB2,YOD1,C4BPB,C1ORF116,C4BPA,PIGR,C1orf116
Genomic distribution of SEs associated with PIGR
Genome Browser

The strength of the tissue affected by the gene

Expression of PIGR

Cell line (ENCODE) Primary cell (ENCODE)Tissue (NCBI) Normal tissue (GTEx) Cell line (CCLE)