Gene overview

Strategies/Algorithm: lasso Ensembl ID: ENSG00000100836
Gene: PABPN1 Gene type: protein_coding
Strand: + External links:
Genomic region: chr14:23321289-23326185 Genome Browser:

Super-enhancer search result of gene-based

SE ID SE Region Sample ID Tissue type Biosample name SE rank Element Common SNP eQTL Risk SNP TFBS CRISPR Cas9 Gene
SE_04_000200326 chr14:23276172-23303735 Sample_04_0002 Blood cold shocked K562 326 3 715 44 0 104 1486 PPP1R3E,HOMEZ,SLC22A17,PABPN1,BCL2L2,RNF212B,BCL2L2-PABPN1
SE_04_000100390 chr14:23276935-23303632 Sample_04_0001 Blood heat shocked K562 390 3 689 42 0 94 1354 PPP1R3E,HOMEZ,SLC22A17,PABPN1,BCL2L2,RNF212B,BCL2L2-PABPN1
SE_02_054500821 chr14:23277508-23303373 Sample_02_0545 Bone marrow K562 WT 821 8 664 40 0 90 1312 PPP1R3E,HOMEZ,SLC22A17,PABPN1,BCL2L2,RNF212B,BCL2L2-PABPN1
SE_02_111600775 chr14:23277623-23301706 Sample_02_1116 Haematopoietic and lymphoid tissue bone marrow K562_native 775 7 615 39 0 51 974 PPP1R3E,HOMEZ,BCL2L2,PABPN1,RNF212B,BCL2L2-PABPN1
SE_02_113000473 chr14:23277633-23301651 Sample_02_1130 Haematopoietic and lymphoid tissue bone marrow K562_??Np63?? expressing 473 6 611 39 0 42 964 PPP1R3E,HOMEZ,BCL2L2,PABPN1,RNF212B,BCL2L2-PABPN1
SE_01_003900625 chr14:23278071-23303135 Sample_01_0039 Haematopoietic and lymphoid tissue bone marrow K562 625 6 642 40 0 90 1312 HOMEZ,PPP1R3E,SLC22A17,PABPN1,BCL2L2,BCL2L2-PABPN1,HOEZ
SE_00_002100888 chr14:23285139-23303327 Sample_00_0021 Lung lung_3y 888 3 474 30 0 84 1312 HOMEZ,PPP1R3E,SLC22A17,PABPN1,BCL2L2,BCL2L2-PABPN1,HOEZ,IL25
SE_02_077501455 chr14:23316567-23335617 Sample_02_0775 Pancreas EndoC-BH1_SE 1455 5 506 33 0 140 1069 BCL2L2-PABPN1,PABPN1,PPP1R3E,SLC22A17,EFS,HOMEZ,CMTM5,IL25,BCL2L2,MYH6

Genomic distribution of SEs associated with PABPN1

The strength of the tissue affected by the gene


Expression of PABPN1