SEdb 2.0
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Gene overview

Strategies/Algorithm: lasso Ensembl ID: ENSG00000141698
Gene: NT5C3B Gene type: protein_coding
Strand: - External links:
Genomic region: chr17:41825057-41836260 Genome Browser:

Super-enhancer search result of gene-based

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SE ID SE Region Sample ID Tissue type Biosample name SE rank Element Common SNP eQTL Risk SNP TFBS CRISPR Cas9 Gene
SE_02_094700048 chr17:41645251-41679762 Sample_02_0947 Tongue Cal27 48 9 979 119 1 46 0 EIF1,GAST,KRT17,KRT16,KRT42P,KRT14,KRT15,KRT32,KRT36,NT5C3B
SE_02_094600260 chr17:41645664-41679760 Sample_02_0946 Tongue HN12 260 5 971 118 1 46 0 EIF1,GAST,KRT17,KRT16,KRT42P,KRT14,KRT15,KRT32,KRT36,NT5C3B
SE_02_098900159 chr17:41648088-41706257 Sample_02_0989 Kidney kidney cortex_WT 159 16 1689 194 2 110 400 EIF1,HAP1,GAST,KRT17,KRT42P,KRT16,KRT14,ACLY,LEPREL4,KLHL11,FKBP10,JUP,TTC25,NT5C3B
SE_02_123800100 chr17:41648119-41667129 Sample_02_1238 Skin MS1_virus_positive 100 11 527 43 0 45 0 EIF1,GAST,KRT17,KRT16,KRT42P,KRT9,KRT14,NT5C3B
SE_02_146400106 chr17:41759181-41801655 Sample_02_1464 Ovary CAOV4 106 14 1204 112 2 225 1040 JUP,GAST,HAP1,P3H4,NT5C3B,KLHL10,FKBP10,DNAJC7,NKIRAS2,EIF1,LEPREL4,KLHL11
SE_02_080800227 chr17:41759637-41803987 Sample_02_0808 Ovary RMG1_ARID1A KO 227 19 1257 115 2 238 1439 JUP,P3H4,GAST,HAP1,NT5C3B,KLHL10,FKBP10,DNAJC7,NKIRAS2,EIF1,LEPREL4,KLHL11
SE_02_092900317 chr17:41762691-41801666 Sample_02_0929 Mid-gestation placenta trophoblast__CytT 317 13 1102 104 2 225 1040 JUP,FKBP10,HAP1,P3H4,NT5C3B,KLHL10,LEPREL4
SE_02_093000320 chr17:41763112-41801685 Sample_02_0930 Mid-gestation placenta trophoblast__SynT 320 20 1091 104 2 219 995 JUP,FKBP10,HAP1,P3H4,NT5C3B,KLHL10,LEPREL4
SE_01_010700083 chr17:41768744-41801817 Sample_01_0107 Esophagus esophagus squamous epithelium 83 5 934 90 2 197 681 JUP,FKBP10,HAP1,P3H4,NT5C3B,KLHL10,KRT16,EIF1,LEPREL4
SE_02_146500086 chr17:41769460-41809868 Sample_02_1465 Ovary CAOV4cis 86 11 1157 112 2 208 1182 JUP,P3H4,FKBP10,HAP1,NT5C3B,KLHL10,DNAJC7,NKIRAS2,EIF1,LEPREL4,KLHL11
SE_02_113200234 chr17:41770205-41801676 Sample_02_1132 Pancreas KLM1 wt 234 17 871 87 2 171 421 JUP,FKBP10,HAP1,P3H4,NT5C3B,KLHL10,LEPREL4
SE_02_047700216 chr17:41770303-41807502 Sample_02_0477 Colon intestinal epithelial organoids_139a 216 14 1050 104 2 189 908 JUP,P3H4,FKBP10,HAP1,NT5C3B,KLHL10,EIF1,LEPREL4,KLHL11
SE_02_077001088 chr17:41771314-41801560 Sample_02_0770 Ovary OVCA429_shLuc 1088 27 830 83 2 171 421 JUP,FKBP10,HAP1,P3H4,NT5C3B,KLHL10,DNAJC7,NKIRAS2,EIF1,LEPREL4,KLHL11
SE_02_076700783 chr17:41771558-41801256 Sample_02_0767 Ovary OVCA429 783 15 821 83 2 170 398 JUP,FKBP10,HAP1,P3H4,NT5C3B,KLHL10,DNAJC7,NKIRAS2,EIF1,LEPREL4,KLHL11
SE_02_048000359 chr17:41771951-41801689 Sample_02_0480 Gingival epithelial HGEP 359 14 820 82 2 169 306 JUP,FKBP10,HAP1,P3H4,NT5C3B,KLHL10,KRT17,KRT16,EIF1,LEPREL4,KLHL11
SE_02_077100924 chr17:41772028-41801496 Sample_02_0771 Ovary OVCA429_shGRHL2 924 17 814 82 2 169 281 JUP,FKBP10,HAP1,P3H4,NT5C3B,KLHL10,DNAJC7,NKIRAS2,EIF1,LEPREL4,KLHL11
Genomic distribution of SEs associated with NT5C3B
Genome Browser

The strength of the tissue affected by the gene

Expression of NT5C3B

Cell line (ENCODE) Primary cell (ENCODE)Tissue (NCBI) Normal tissue (GTEx) Cell line (CCLE)