Gene overview

Strategies/Algorithm: lasso Ensembl ID: ENSG00000025770
Gene: NCAPH2 Gene type: protein_coding
Strand: + External links:
Genomic region: chr22:50508224-50524780 Genome Browser:

Super-enhancer search result of gene-based

SE ID SE Region Sample ID Tissue type Biosample name SE rank Element Common SNP eQTL Risk SNP TFBS CRISPR Cas9 Gene
SE_01_010700264 chr22:50267936-50314971 Sample_01_0107 Esophagus esophagus squamous epithelium 264 15 1687 152 1 323 5114 MAPK11,PLXNB2,DENND6B,PPP6R2,TUBGCP6,HDAC10,MAPK12,ODF3B,NCAPH2,SELO
SE_02_093500052 chr22:50275889-50307736 Sample_02_0935 Retinal Pigmented Epithelial RPE188_Con 52 7 1160 91 1 253 3406 PLXNB2,PPP6R2,MAPK11,TUBGCP6,DENND6B,HDAC10,MAPK12,ARSA,MOV10L1,SBF1,NCAPH2,TRABD,SELO,LMF2,PANX2
SE_02_132100242 chr22:50281628-50314866 Sample_02_1321 Connective Tissue HT1080_FUS-DDIT3 242 7 1209 103 1 225 3049 PLXNB2,DENND6B,PPP6R2,MAPK11,TUBGCP6,HDAC10,MAPK12,SCO2,ADM2,SBF1,NCAPH2,TRABD,SELO,PANX2
SE_02_132200187 chr22:50281700-50309453 Sample_02_1322 Connective Tissue HT1080_WT 187 3 988 84 1 194 2191 PLXNB2,PPP6R2,MAPK11,TUBGCP6,DENND6B,HDAC10,MAPK12,SCO2,ADM2,SBF1,NCAPH2,TRABD,SELO,PANX2
SE_02_093800348 chr22:50281955-50307631 Sample_02_0938 Retinal Pigmented Epithelial RPE190_TnT 348 8 928 73 1 173 2075 PLXNB2,PPP6R2,MAPK11,TUBGCP6,DENND6B,HDAC10,MAPK12,ARSA,MOV10L1,SBF1,NCAPH2,TRABD,SELO,LMF2,PANX2
SE_02_093600726 chr22:50281959-50307721 Sample_02_0936 Retinal Pigmented Epithelial RPE188_TnT 726 13 929 73 1 183 2112 PLXNB2,PPP6R2,MAPK11,TUBGCP6,DENND6B,HDAC10,MAPK12,ARSA,MOV10L1,SBF1,NCAPH2,TRABD,SELO,LMF2,PANX2
SE_02_132000405 chr22:50282005-50314419 Sample_02_1320 Connective Tissue HT1080_EWS-FLI1 405 4 1170 102 1 210 2871 PLXNB2,DENND6B,PPP6R2,MAPK11,TUBGCP6,HDAC10,MAPK12,SCO2,ADM2,SBF1,NCAPH2,TRABD,SELO,PANX2
SE_02_131900194 chr22:50282048-50314835 Sample_02_1319 Connective Tissue HT1080_DDIT3 194 5 1189 103 1 213 2951 PLXNB2,DENND6B,PPP6R2,MAPK11,TUBGCP6,HDAC10,MAPK12,SCO2,ADM2,SBF1,NCAPH2,TRABD,SELO,PANX2
SE_02_088001529 chr22:50282049-50307627 Sample_02_0880 Ovary SVOG3e cells_noDox_transduced_V5-FOXL2_WT 1529 3 923 73 1 173 2056 PLXNB2,PPP6R2,MAPK11,TUBGCP6,DENND6B,HDAC10,MAPK12,ODF3B,ARSA,SCO2,SBF1,NCAPH2,MIOX,TRABD,SELO
SE_02_113900863 chr22:50282097-50307751 Sample_02_1139 Retinal Pigmented Epithelial RPE1-anaphase/telophase 863 3 924 73 1 182 2095 PLXNB2,PPP6R2,MAPK11,TUBGCP6,DENND6B,HDAC10,MAPK12,ARSA,MOV10L1,SBF1,NCAPH2,TRABD,SELO,LMF2,PANX2
SE_02_113701410 chr22:50282100-50307719 Sample_02_1137 Retinal Pigmented Epithelial RPE1-interphase 1410 5 924 73 1 181 2085 PLXNB2,PPP6R2,MAPK11,TUBGCP6,DENND6B,HDAC10,MAPK12,ARSA,MOV10L1,SBF1,NCAPH2,TRABD,SELO,LMF2,PANX2
SE_02_088201197 chr22:50282196-50307640 Sample_02_0882 Ovary SVOG3e_cells_noDox_transduced with V5-FOXL2 C134W 1197 4 918 73 1 171 2024 PLXNB2,PPP6R2,MAPK11,TUBGCP6,DENND6B,HDAC10,MAPK12,ODF3B,ARSA,SCO2,SBF1,NCAPH2,MIOX,TRABD,SELO
SE_02_113801015 chr22:50282250-50307727 Sample_02_1138 Retinal Pigmented Epithelial RPE1-prometaphase 1015 5 915 73 1 180 2044 PLXNB2,PPP6R2,MAPK11,TUBGCP6,DENND6B,HDAC10,MAPK12,ARSA,MOV10L1,SBF1,NCAPH2,TRABD,SELO,LMF2,PANX2
SE_02_093700567 chr22:50285202-50307629 Sample_02_0937 Retinal Pigmented Epithelial RPE190_Con 567 5 754 63 0 148 1286 PLXNB2,PPP6R2,MAPK11,TUBGCP6,DENND6B,HDAC10,MAPK12,ARSA,MOV10L1,SBF1,NCAPH2,TRABD,SELO,LMF2,PANX2
SE_02_094100307 chr22:50292737-50307688 Sample_02_0941 Brain T98G 307 2 473 44 0 100 209 PLXNB2,PPP6R2,MAPK11,TUBGCP6,DENND6B,HDAC10,MAPK12,MOV10L1,SCO2,SBF1,NCAPH2,MLC1,SELO,LMF2
SE_02_062200615 chr22:50292833-50314173 Sample_02_0622 Blood EOL1_Naive 615 12 706 71 0 129 941 PLXNB2,DENND6B,PPP6R2,MAPK11,TUBGCP6,HDAC10,MAPK12,SBF1,NCAPH2,TRABD,SELO,PANX2
SE_01_011200456 chr22:50303313-50307657 Sample_01_0112 Embryonic kidney HEK293_encode 456 3 127 13 0 40 89 PLXNB2,PPP6R2,MAPK11,MAPK12,DENND6B,ARSA,SCO2,SBF1,NCAPH2,TUBGCP6,TRABD,SELO,HDAC10,LMF2
SE_02_121800358 chr22:50466720-50484898 Sample_02_1218 Bone marrow Daudi 358 6 700 57 0 95 1469 ADM2,SBF1,SCO2,ODF3B,MIOX,NCAPH2,LMF2,TYMP,CHKB,PLXNB2
SE_02_153000009 chr22:50523468-50546779 Sample_02_1530 Peripheral blood neutrophils_0BA0X 9 1 785 113 9 101 2110 NCAPH2,ODF3B,SCO2,TYMP,KLHDC7B,CHKB-AS1,ADM2,MIOX,CPT1B,CHKB,SYCE3,LMF2,SBF1,ARSA
SE_02_153100005 chr22:50524932-50546280 Sample_02_1531 Peripheral blood neutrophils_0B9ZK 5 1 712 106 7 85 1826 ODF3B,SCO2,TYMP,KLHDC7B,CHKB-AS1,ADM2,MIOX,CPT1B,CHKB,SYCE3,LMF2,NCAPH2,SBF1,ARSA
SE_02_152900012 chr22:50524951-50551407 Sample_02_1529 Peripheral blood neutrophils_0BC75 12 1 867 128 11 136 2672 ODF3B,KLHDC7B,SCO2,SYCE3,TYMP,CHKB-AS1,ADM2,MIOX,CPT1B,CHKB,MAPK8IP2,LMF2,NCAPH2,SBF1,ARSA
SE_02_092900180 chr22:50528025-50544894 Sample_02_0929 Mid-gestation placenta trophoblast__CytT 180 9 565 83 7 57 1181 ODF3B,TYMP,KLHDC7B,CHKB-AS1,ADM2,SCO2,MIOX,CPT1B,CHKB,SYCE3,LMF2,NCAPH2,DENND6B,ARSA,SBF1
SE_01_010400166 chr22:50528421-50544939 Sample_01_0104 Lung upper lobe of left lung 166 4 549 81 7 57 1168 ODF3B,TYMP,KLHDC7B,CHKB-AS1,ADM2,SCO2,MIOX,CPT1B,CHKB,SYCE3,LMF2,NCAPH2,ARSA,SBF1
SE_01_010700246 chr22:50528524-50545373 Sample_01_0107 Esophagus esophagus squamous epithelium 246 4 553 81 6 56 1147 ODF3B,TYMP,KLHDC7B,CHKB-AS1,ADM2,SCO2,MIOX,CPT1B,CHKB,SYCE3,LMF2,NCAPH2,ARSA,SBF1,MAPK8IP2
SE_02_142900491 chr22:50528739-50544928 Sample_02_1429 Blood GM12878_WT 491 4 538 79 6 53 1101 ODF3B,TYMP,KLHDC7B,CHKB-AS1,ADM2,SCO2,MIOX,CPT1B,CHKB,SYCE3,LMF2,NCAPH2,ARSA,RABL2B,SBF1,MAPK8IP2,SHANK3
SE_00_005500070 chr22:50528792-50545794 Sample_00_0055 Spleen spleen 34y 70 7 561 85 6 54 1094 ODF3B,TYMP,KLHDC7B,CHKB-AS1,ADM2,SCO2,MIOX,CPT1B,CHKB,SYCE3,LMF2,NCAPH2,ARSA
SE_02_112900598 chr22:50529241-50540308 Sample_02_1129 Adipose visceral adipose_CTL_HCTR13 598 6 368 56 5 48 1023 ODF3B,TYMP,KLHDC7B,CHKB-AS1,ADM2,SCO2,MIOX,CPT1B,CHKB,SYCE3,LMF2,NCAPH2,ARSA,SBF1,MAPK8IP2
SE_02_094700114 chr22:50529306-50546401 Sample_02_0947 Tongue Cal27 114 2 564 88 6 53 1007 ODF3B,TYMP,KLHDC7B,CHKB-AS1,ADM2,SCO2,MIOX,CPT1B,CHKB,SYCE3,LMF2,NCAPH2,DENND6B,ARSA,SBF1,MAPK8IP2,SHANK3
SE_02_046501098 chr22:50529313-50544575 Sample_02_0465 Adipose subcutaneous adipocytes 1098 5 518 77 6 48 1003 ODF3B,TYMP,KLHDC7B,CHKB-AS1,ADM2,SCO2,MIOX,CPT1B,CHKB,SYCE3,LMF2,NCAPH2,ARSA,SBF1,MAPK8IP2
SE_02_094600829 chr22:50529428-50544825 Sample_02_0946 Tongue HN12 829 4 518 77 6 48 965 ODF3B,TYMP,KLHDC7B,CHKB-AS1,ADM2,SCO2,MIOX,CPT1B,CHKB,SYCE3,LMF2,NCAPH2,DENND6B,ARSA,SBF1,MAPK8IP2,SHANK3
SE_02_059100377 chr22:50529602-50545090 Sample_02_0591 PBMCs adult CD4+CD25-CD45RA+CD27+ naive T cells 377 3 512 77 6 47 926 ODF3B,TYMP,KLHDC7B,CHKB-AS1,ADM2,SCO2,MIOX,CPT1B,CHKB,SYCE3,LMF2,NCAPH2,ARSA,SBF1,MAPK8IP2
SE_02_122500189 chr22:50529882-50546669 Sample_02_1225 Bone marrow RAJI 189 7 545 87 6 53 849 ODF3B,TYMP,KLHDC7B,CHKB-AS1,ADM2,SCO2,MIOX,CPT1B,CHKB,SYCE3,LMF2,NCAPH2,ARSA,MAPK8IP2
SE_02_121800535 chr22:50530103-50546352 Sample_02_1218 Bone marrow Daudi 535 8 536 86 6 49 778 ODF3B,KLHDC7B,CHKB-AS1,TYMP,ADM2,SCO2,MIOX,CPT1B,CHKB,SYCE3,LMF2,NCAPH2,SBF1
SE_02_062200663 chr22:50530310-50543951 Sample_02_0622 Blood EOL1_Naive 663 7 460 72 6 45 703 ODF3B,KLHDC7B,CHKB-AS1,TYMP,ADM2,SCO2,MIOX,CPT1B,CHKB,SYCE3,LMF2,NCAPH2,DENND6B,ARSA,PPP6R2,SBF1,MAPK8IP2
SE_02_153300316 chr22:50533081-50545538 Sample_02_1533 Lung purified primary alveolar epithelial type 2 cells 316 4 426 73 5 1 0 KLHDC7B,CHKB-AS1,SYCE3,ODF3B,SCO2,MIOX,CPT1B,CHKB,LMF2,NCAPH2,TYMP,ARSA,ADM2,SBF1
SE_02_151200336 chr22:50533161-50545438 Sample_02_1512 Lung Purified AT2 cells 336 3 420 72 5 1 0 KLHDC7B,CHKB-AS1,SYCE3,ODF3B,SCO2,MIOX,CPT1B,CHKB,LMF2,NCAPH2,TYMP,ARSA,ADM2,SBF1
SE_02_092700110 chr22:50536042-50545523 Sample_02_0927 Peripheral blood neutrophils_US 110 1 308 52 4 1 0 KLHDC7B,CHKB-AS1,SYCE3,ODF3B,SCO2,MIOX,CPT1B,CHKB,LMF2,NCAPH2,TYMP,ARSA,SBF1
SE_02_092800161 chr22:50536102-50546811 Sample_02_0928 Peripheral blood neutrophils_Ecoli 161 1 338 60 4 10 0 KLHDC7B,CHKB-AS1,SYCE3,ODF3B,SCO2,MIOX,CPT1B,CHKB,LMF2,NCAPH2,TYMP,ARSA,SBF1
SE_02_071500581 chr22:50537933-50544307 Sample_02_0715 Pancreas SUIT2_TP63dN 581 5 214 36 4 0 0 KLHDC7B,CHKB-AS1,SYCE3,ODF3B,SCO2,CPT1B,CHKB,LMF2,NCAPH2,TYMP,ARSA,ADM2,SBF1,MAPK8IP2
SE_02_047000025 chr22:50539152-50541817 Sample_02_0470 Blood GM12878 25 2 65 14 2 0 0 KLHDC7B,CHKB-AS1,SYCE3,ODF3B,SCO2,CPT1B,CHKB,LMF2,NCAPH2,TYMP,ARSA,RABL2B,ADM2,SBF1,MAPK8IP2,MIOX,SHANK3
SE_00_005500323 chr22:50670564-50733983 Sample_00_0055 Spleen spleen 34y 323 41 1934 115 4 488 3551 SHANK3,RPL23AP82,RABL2B,ARSA,ACR,MAPK8IP2,CHKB,ODF3B,TYMP,NCAPH2

Genomic distribution of SEs associated with NCAPH2

The strength of the tissue affected by the gene


Expression of NCAPH2