Gene overview

Strategies/Algorithm: lasso Ensembl ID: ENSG00000122224
Gene: LY9 Gene type: protein_coding
Strand: + External links:
Genomic region: chr1:160796074-160828261 Genome Browser:

Super-enhancer search result of gene-based

SE ID SE Region Sample ID Tissue type Biosample name SE rank Element Common SNP eQTL Risk SNP TFBS CRISPR Cas9 Gene
SE_02_142900426 chr1:160637485-160650116 Sample_02_1429 Blood GM12878_WT 426 1 367 19 1 35 143 SLAMF1,CD84,SLAMF7,LY9
SE_01_003000031 chr1:160703574-160791195 Sample_01_0030 Haematopoietic and lymphoid tissue blood GM12878 31 10 2589 176 16 68 760 CD48,SLAMF7,LY9,CD244,SLAF1,SLAF7
SE_02_142901179 chr1:160739271-160748417 Sample_02_1429 Blood GM12878_WT 1179 1 284 19 1 9 108 SLAMF7,LY9,CD48,SLAMF1
SE_02_151300686 chr1:160990170-161019878 Sample_02_1513 Lung Transitional AT2->1 cells 686 6 770 97 0 47 953 F11R,TSTD1,USF1,ITLN2,ARHGAP30,LY9,PFDN2,PVRL4,KLHDC9
SE_02_151400654 chr1:160990779-161019408 Sample_02_1514 Lung Differentiated AT1-like cells 654 8 740 94 0 47 953 F11R,TSTD1,USF1,ITLN2,ARHGAP30,LY9,PFDN2,PVRL4,KLHDC9
SE_02_153300381 chr1:160994217-161019338 Sample_02_1533 Lung purified primary alveolar epithelial type 2 cells 381 6 663 90 0 47 953 F11R,TSTD1,USF1,ITLN2,ARHGAP30,LY9,PFDN2,PVRL4,KLHDC9
SE_02_151200410 chr1:160995744-161019134 Sample_02_1512 Lung Purified AT2 cells 410 5 616 82 0 47 864 F11R,TSTD1,USF1,ITLN2,ARHGAP30,LY9,PFDN2,PVRL4,KLHDC9
SE_01_010400483 chr1:160997272-161021922 Sample_01_0104 Lung upper lobe of left lung 483 6 655 83 0 63 876 F11R,ARHGAP30,TSTD1,USF1,ITLN2,NIT1,LY9,PFDN2,ITLN1,PVRL4,KLHDC9
SE_00_004900642 chr1:160997616-161019401 Sample_00_0049 Small intestine small intestine 30y 642 9 577 75 0 46 646 F11R,TSTD1,USF1,ITLN2,DEDD,PCP4L1,NIT1,ARHGAP30,LY9,NDUFS2,NR1I3,PFDN2,UFC1,ITLN1,PVRL4

Genomic distribution of SEs associated with LY9

The strength of the tissue affected by the gene


Expression of LY9