SEdb 2.0
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Gene overview

Strategies/Algorithm: lasso Ensembl ID:
Gene: LEPREL4 Gene type:
Strand: External links:
Genomic region: :- Genome Browser:

Super-enhancer search result of gene-based

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SE ID SE Region Sample ID Tissue type Biosample name SE rank Element Common SNP eQTL Risk SNP TFBS CRISPR Cas9 Gene
SE_02_066600009 chr17:41645770-41679125 Sample_02_0666 Prostate RWPE1 Lacz rep1 9 9 959 118 1 46 0 EIF1,GAST,KRT17,KRT16,KRT42P,KRT14,LEPREL4
SE_02_047700249 chr17:41648043-41679622 Sample_02_0477 Colon intestinal epithelial organoids_139a 249 8 908 114 1 46 0 EIF1,GAST,KRT17,KRT16,KRT42P,KRT14,LEPREL4,FKBP10
SE_02_098900159 chr17:41648088-41706257 Sample_02_0989 Kidney kidney cortex_WT 159 16 1689 194 2 110 400 EIF1,HAP1,GAST,KRT17,KRT42P,KRT16,KRT14,ACLY,LEPREL4,KLHL11,FKBP10,JUP,TTC25,NT5C3B
SE_02_047800334 chr17:41648092-41679681 Sample_02_0478 Colon normal colon mucosa 334 11 908 114 1 46 0 EIF1,GAST,KRT17,KRT16,KRT42P,KRT14,LEPREL4
SE_01_009900246 chr17:41648099-41679626 Sample_01_0099 Colon transverse colon 246 7 908 114 1 46 0 EIF1,GAST,KRT17,KRT16,KRT42P,KRT14,LEPREL4
SE_01_010900322 chr17:41648116-41697888 Sample_01_0109 Colon transverse colon_54y 322 11 1447 148 2 109 400 EIF1,HAP1,GAST,KRT17,KRT42P,KRT16,KRT14,LEPREL4
SE_02_066500013 chr17:41649369-41666138 Sample_02_0665 Prostate RWPE1 Schlap1 rep1 13 6 482 40 0 45 0 EIF1,GAST,KRT17,KRT16,KRT42P,KRT14,LEPREL4
SE_02_092901194 chr17:41665536-41692127 Sample_02_0929 Mid-gestation placenta trophoblast__CytT 1194 9 800 100 2 63 400 EIF1,GAST,KRT17,HAP1,KRT42P,LEPREL4,FKBP10,KRT19,KRT15
SE_02_146400106 chr17:41759181-41801655 Sample_02_1464 Ovary CAOV4 106 14 1204 112 2 225 1040 JUP,GAST,HAP1,P3H4,NT5C3B,KLHL10,FKBP10,DNAJC7,NKIRAS2,EIF1,LEPREL4,KLHL11
SE_02_080800227 chr17:41759637-41803987 Sample_02_0808 Ovary RMG1_ARID1A KO 227 19 1257 115 2 238 1439 JUP,P3H4,GAST,HAP1,NT5C3B,KLHL10,FKBP10,DNAJC7,NKIRAS2,EIF1,LEPREL4,KLHL11
SE_02_092900317 chr17:41762691-41801666 Sample_02_0929 Mid-gestation placenta trophoblast__CytT 317 13 1102 104 2 225 1040 JUP,FKBP10,HAP1,P3H4,NT5C3B,KLHL10,LEPREL4
SE_02_093000320 chr17:41763112-41801685 Sample_02_0930 Mid-gestation placenta trophoblast__SynT 320 20 1091 104 2 219 995 JUP,FKBP10,HAP1,P3H4,NT5C3B,KLHL10,LEPREL4
SE_01_010700083 chr17:41768744-41801817 Sample_01_0107 Esophagus esophagus squamous epithelium 83 5 934 90 2 197 681 JUP,FKBP10,HAP1,P3H4,NT5C3B,KLHL10,KRT16,EIF1,LEPREL4
SE_02_146500086 chr17:41769460-41809868 Sample_02_1465 Ovary CAOV4cis 86 11 1157 112 2 208 1182 JUP,P3H4,FKBP10,HAP1,NT5C3B,KLHL10,DNAJC7,NKIRAS2,EIF1,LEPREL4,KLHL11
SE_02_113200234 chr17:41770205-41801676 Sample_02_1132 Pancreas KLM1 wt 234 17 871 87 2 171 421 JUP,FKBP10,HAP1,P3H4,NT5C3B,KLHL10,LEPREL4
SE_02_047700216 chr17:41770303-41807502 Sample_02_0477 Colon intestinal epithelial organoids_139a 216 14 1050 104 2 189 908 JUP,P3H4,FKBP10,HAP1,NT5C3B,KLHL10,EIF1,LEPREL4,KLHL11
SE_02_077001088 chr17:41771314-41801560 Sample_02_0770 Ovary OVCA429_shLuc 1088 27 830 83 2 171 421 JUP,FKBP10,HAP1,P3H4,NT5C3B,KLHL10,DNAJC7,NKIRAS2,EIF1,LEPREL4,KLHL11
SE_02_076700783 chr17:41771558-41801256 Sample_02_0767 Ovary OVCA429 783 15 821 83 2 170 398 JUP,FKBP10,HAP1,P3H4,NT5C3B,KLHL10,DNAJC7,NKIRAS2,EIF1,LEPREL4,KLHL11
SE_02_048000359 chr17:41771951-41801689 Sample_02_0480 Gingival epithelial HGEP 359 14 820 82 2 169 306 JUP,FKBP10,HAP1,P3H4,NT5C3B,KLHL10,KRT17,KRT16,EIF1,LEPREL4,KLHL11
SE_02_077100924 chr17:41772028-41801496 Sample_02_0771 Ovary OVCA429_shGRHL2 924 17 814 82 2 169 281 JUP,FKBP10,HAP1,P3H4,NT5C3B,KLHL10,DNAJC7,NKIRAS2,EIF1,LEPREL4,KLHL11
SE_01_011200354 chr17:41777130-41801689 Sample_01_0112 Embryonic kidney HEK293_encode 354 5 672 71 2 144 279 JUP,FKBP10,HAP1,P3H4,NT5C3B,KLHL10,EIF1,LEPREL4
Genomic distribution of SEs associated with LEPREL4
Genome Browser

The strength of the tissue affected by the gene

Expression of LEPREL4

Cell line (ENCODE) Primary cell (ENCODE)Tissue (NCBI) Normal tissue (GTEx) Cell line (CCLE)