SEdb 2.0
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Gene overview

Strategies/Algorithm: lasso Ensembl ID: ENSG00000170523
Gene: KRT83 Gene type: protein_coding
Strand: - External links:
Genomic region: chr12:52314301-52321398 Genome Browser:

Super-enhancer search result of gene-based

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SE ID SE Region Sample ID Tissue type Biosample name SE rank Element Common SNP eQTL Risk SNP TFBS CRISPR Cas9 Gene
SE_02_066600007 chr12:52143319-52187297 Sample_02_0666 Prostate RWPE1 Lacz rep1 7 9 1367 76 1 85 1272 KRT80,OR7E47P,LINC00592,KRT7,C12ORF80,ACVRL1,NR4A1,C12orf80,KRT83,ACVR1B,ATG101
SE_02_066500007 chr12:52144070-52156905 Sample_02_0665 Prostate RWPE1 Schlap1 rep1 7 5 408 17 0 25 0 KRT80,ACVRL1,NR4A1,C12orf80,KRT83,ACVR1B,ATG101
SE_02_049200479 chr12:52275517-52288813 Sample_02_0492 Pharyng Detroit 562_LPS 479 6 451 65 3 48 662 KRT81,KRT86,KRT7,KRT83,KRT80
SE_02_049100536 chr12:52277354-52288822 Sample_02_0491 Pharyng Detroit 562-Control 536 4 406 59 3 47 583 KRT81,KRT86,KRT7,KRT83,KRT80
SE_02_085900170 chr12:52277441-52289652 Sample_02_0859 Prostate PC3 170 1 429 59 3 48 654 KRT81,KRT86,KRT7,KRT83,KRT80,KRT85
SE_02_094800720 chr12:52277800-52284686 Sample_02_0948 Pharyng Detroit562 720 2 226 41 1 14 0 KRT86,KRT7,KRT83,KRT81,KRT80
SE_02_066600394 chr12:52278683-52282193 Sample_02_0666 Prostate RWPE1 Lacz rep1 394 1 111 22 1 14 0 KRT86,KRT7,KRT83,KRT81,KRT80,C12orf80
SE_02_066500217 chr12:52279124-52281764 Sample_02_0665 Prostate RWPE1 Schlap1 rep1 217 1 81 13 0 14 0 KRT86,KRT7,KRT83,KRT81,KRT80,C12orf80
Genomic distribution of SEs associated with KRT83
Genome Browser

The strength of the tissue affected by the gene

Expression of KRT83

Cell line (ENCODE) Primary cell (ENCODE)Tissue (NCBI) Normal tissue (GTEx) Cell line (CCLE)