SEdb 2.0
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Gene overview

Strategies/Algorithm: lasso Ensembl ID: ENSG00000173801
Gene: JUP Gene type: protein_coding
Strand: - External links:
Genomic region: chr17:41754604-41786931 Genome Browser:

Super-enhancer search result of gene-based

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SE ID SE Region Sample ID Tissue type Biosample name SE rank Element Common SNP eQTL Risk SNP TFBS CRISPR Cas9 Gene
SE_01_010700051 chr17:41642208-41697478 Sample_01_0107 Esophagus esophagus squamous epithelium 51 9 1573 152 2 117 400 EIF1,HAP1,GAST,KRT17,KRT42P,KRT16,KRT19,KRT15,KRT9,JUP,KRT13
SE_02_048000075 chr17:41645313-41679116 Sample_02_0480 Gingival epithelial HGEP 75 18 969 118 1 46 0 EIF1,GAST,KRT17,KRT16,KRT42P,KRT14,KRT15,FKBP10,JUP
SE_02_098900159 chr17:41648088-41706257 Sample_02_0989 Kidney kidney cortex_WT 159 16 1689 194 2 110 400 EIF1,HAP1,GAST,KRT17,KRT42P,KRT16,KRT14,ACLY,LEPREL4,KLHL11,FKBP10,JUP,TTC25,NT5C3B
SE_01_010400349 chr17:41648363-41697354 Sample_01_0104 Lung upper lobe of left lung 349 11 1434 146 2 109 400 EIF1,HAP1,GAST,KRT17,KRT42P,KRT16,KRT9,JUP
SE_02_153300399 chr17:41651057-41691030 Sample_02_1533 Lung purified primary alveolar epithelial type 2 cells 399 8 1175 129 2 101 301 EIF1,HAP1,GAST,KRT17,KRT42P,KRT16,KRT9,JUP
SE_02_151200409 chr17:41651057-41691069 Sample_02_1512 Lung Purified AT2 cells 409 7 1177 129 2 101 306 EIF1,HAP1,GAST,KRT17,KRT42P,KRT16,KRT9,JUP
SE_02_146400106 chr17:41759181-41801655 Sample_02_1464 Ovary CAOV4 106 14 1204 112 2 225 1040 JUP,GAST,HAP1,P3H4,NT5C3B,KLHL10,FKBP10,DNAJC7,NKIRAS2,EIF1,LEPREL4,KLHL11
SE_02_080800227 chr17:41759637-41803987 Sample_02_0808 Ovary RMG1_ARID1A KO 227 19 1257 115 2 238 1439 JUP,P3H4,GAST,HAP1,NT5C3B,KLHL10,FKBP10,DNAJC7,NKIRAS2,EIF1,LEPREL4,KLHL11
SE_02_092900317 chr17:41762691-41801666 Sample_02_0929 Mid-gestation placenta trophoblast__CytT 317 13 1102 104 2 225 1040 JUP,FKBP10,HAP1,P3H4,NT5C3B,KLHL10,LEPREL4
SE_02_093000320 chr17:41763112-41801685 Sample_02_0930 Mid-gestation placenta trophoblast__SynT 320 20 1091 104 2 219 995 JUP,FKBP10,HAP1,P3H4,NT5C3B,KLHL10,LEPREL4
SE_01_010700083 chr17:41768744-41801817 Sample_01_0107 Esophagus esophagus squamous epithelium 83 5 934 90 2 197 681 JUP,FKBP10,HAP1,P3H4,NT5C3B,KLHL10,KRT16,EIF1,LEPREL4
SE_02_146500086 chr17:41769460-41809868 Sample_02_1465 Ovary CAOV4cis 86 11 1157 112 2 208 1182 JUP,P3H4,FKBP10,HAP1,NT5C3B,KLHL10,DNAJC7,NKIRAS2,EIF1,LEPREL4,KLHL11
SE_02_077001088 chr17:41771314-41801560 Sample_02_0770 Ovary OVCA429_shLuc 1088 27 830 83 2 171 421 JUP,FKBP10,HAP1,P3H4,NT5C3B,KLHL10,DNAJC7,NKIRAS2,EIF1,LEPREL4,KLHL11
SE_02_076700783 chr17:41771558-41801256 Sample_02_0767 Ovary OVCA429 783 15 821 83 2 170 398 JUP,FKBP10,HAP1,P3H4,NT5C3B,KLHL10,DNAJC7,NKIRAS2,EIF1,LEPREL4,KLHL11
SE_02_077100924 chr17:41772028-41801496 Sample_02_0771 Ovary OVCA429_shGRHL2 924 17 814 82 2 169 281 JUP,FKBP10,HAP1,P3H4,NT5C3B,KLHL10,DNAJC7,NKIRAS2,EIF1,LEPREL4,KLHL11
SE_01_011200354 chr17:41777130-41801689 Sample_01_0112 Embryonic kidney HEK293_encode 354 5 672 71 2 144 279 JUP,FKBP10,HAP1,P3H4,NT5C3B,KLHL10,EIF1,LEPREL4
Genomic distribution of SEs associated with JUP
Genome Browser

The strength of the tissue affected by the gene

Expression of JUP

Cell line (ENCODE) Primary cell (ENCODE)Tissue (NCBI) Normal tissue (GTEx) Cell line (CCLE)