SEdb 2.0
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Gene overview

Strategies/Algorithm: lasso Ensembl ID: ENSG00000128604
Gene: IRF5 Gene type: protein_coding
Strand: + External links:
Genomic region: chr7:128937457-128950038 Genome Browser:

Super-enhancer search result of gene-based

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SE ID SE Region Sample ID Tissue type Biosample name SE rank Element Common SNP eQTL Risk SNP TFBS CRISPR Cas9 Gene
SE_02_090200918 chr7:128825836-128836854 Sample_02_0902 Heart left ventricle_LV1558 918 6 312 22 2 180 387 FLNC,CCDC136,ATP6V1F,LOC100130705,IRF5
SE_01_009800351 chr7:128825923-128842770 Sample_01_0098 Heart left ventricle_51y 351 2 492 38 3 258 1538 FLNC,CCDC136,ATP6V1F,LOC100130705,IRF5
SE_02_089800717 chr7:128826424-128861211 Sample_02_0898 Heart left ventricle_LV1356 717 9 1067 82 7 578 4848 FLNC,CCDC136,ATP6V1F,LOC100130705,KCP,IRF5
SE_02_089600724 chr7:128826441-128861343 Sample_02_0896 Heart left ventricle_LV1294 724 11 1068 83 7 578 4848 FLNC,CCDC136,ATP6V1F,LOC100130705,KCP,IRF5
SE_02_088700992 chr7:128826442-128842054 Sample_02_0887 Heart left ventricle_LV1121 992 8 453 38 3 252 1342 FLNC,CCDC136,ATP6V1F,LOC100130705,IRF5
SE_00_005200294 chr7:128826477-128844688 Sample_00_0052 Heart left ventricle 3y 294 9 531 41 4 303 1968 FLNC,CCDC136,ATP6V1F,LOC100130705,IRF5
SE_02_089201077 chr7:128826491-128842622 Sample_02_0892 Heart left ventricle_LV1215 1077 8 474 38 3 256 1496 FLNC,CCDC136,ATP6V1F,LOC100130705,IRF5
SE_02_088901145 chr7:128826503-128840232 Sample_02_0889 Heart left ventricle_LV1183 1145 5 391 34 3 223 994 FLNC,CCDC136,ATP6V1F,LOC100130705,IRF5
SE_02_088800690 chr7:128826504-128861358 Sample_02_0888 Heart left ventricle_LV1160 690 8 1067 83 7 578 4848 FLNC,CCDC136,ATP6V1F,LOC100130705,KCP,IRF5
SE_02_089300800 chr7:128826583-128840514 Sample_02_0893 Heart left ventricle_LV1226 800 5 397 32 3 224 1045 FLNC,CCDC136,ATP6V1F,LOC100130705,IRF5
SE_02_090001167 chr7:128826591-128845261 Sample_02_0900 Heart left ventricle_LV1452 1167 8 554 42 5 333 2094 FLNC,CCDC136,ATP6V1F,LOC100130705,IRF5
SE_02_142900392 chr7:128932404-128968257 Sample_02_1429 Blood GM12878_WT 392 9 953 117 13 146 1766 TNPO3,IRF5,KCP,TSPAN33,LOC100130705,ATP6V1F
Genomic distribution of SEs associated with IRF5
Genome Browser

The strength of the tissue affected by the gene

Expression of IRF5

Cell line (ENCODE) Primary cell (ENCODE)Tissue (NCBI) Normal tissue (GTEx) Cell line (CCLE)