SEdb 2.0
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Gene overview

Strategies/Algorithm: lasso Ensembl ID:
Gene: HIST2H3D Gene type:
Strand: External links:
Genomic region: :- Genome Browser:

Super-enhancer search result of gene-based

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SE ID SE Region Sample ID Tissue type Biosample name SE rank Element Common SNP eQTL Risk SNP TFBS CRISPR Cas9 Gene
SE_02_054501040 chr1:149774700-149809805 Sample_02_0545 Bone marrow K562 WT 1040 9 617 42 0 36 908 FCGR1A,HIST2H2BF,HIST2H4B,HIST2H3D,HIST2H2AA3,HIST2H3A,HIST2H3C,HIST2H2BC,HIST2H2AA4,BOLA1,HIST2H2AC,HIST2H2AB,HIST2H2BE
SE_02_098700566 chr1:149775015-149809060 Sample_02_0987 Blood K562_Control_1 566 10 603 42 0 36 908 FCGR1A,HIST2H2BF,HIST2H4B,HIST2H3D,HIST2H2AA3,HIST2H3A,HIST2H3C,HIST2H2BC,HIST2H2AA4,BOLA1,HIST2H2AC,HIST2H2AB,HIST2H2BE
SE_02_098800980 chr1:149775040-149796600 Sample_02_0988 Blood K562_EPZ 980 7 367 17 0 35 908 FCGR1A,HIST2H2BF,HIST2H4B,HIST2H3D,HIST2H3A,HIST2H2AA4,BOLA1,HIST2H2AA3,HIST2H2AC,HIST2H2AB,HIST2H2BE,HIST2H3C
SE_02_054700373 chr1:149775042-149796610 Sample_02_0547 Bone marrow K562_MYO1D_Hub_KO 373 6 368 17 0 35 908 FCGR1A,HIST2H2BF,HIST2H4B,HIST2H3D,HIST2H3A,HIST2H2AA4,BOLA1,HIST2H2AA3,HIST2H2AC,HIST2H2AB,HIST2H2BE,HIST2H3C
SE_00_003900378 chr1:149884406-149889379 Sample_00_0039 Spleen spleen_3y 378 1 122 4 0 66 490 HIST2H2BE,HIST2H2AB,HIST2H2AC,BOLA1,HIST2H2BC,SF3B4,MTMR11,SV2A,HIST2H3C,HIST2H2AA3,FCGR1A,HIST2H2AA4,HIST2H2BF,HIST2H3A,HIST2H3D,HIST2H4A,HIST2H4B,TR11
SE_00_004000179 chr1:149884658-149889478 Sample_00_0040 Spleen spleen_30y 179 1 123 4 0 66 471 HIST2H2BE,HIST2H2AB,HIST2H2AC,BOLA1,HIST2H2BC,SF3B4,MTMR11,SV2A,HIST2H3C,HIST2H2AA3,FCGR1A,HIST2H2AA4,HIST2H2BF,HIST2H3A,HIST2H3D,HIST2H4A,HIST2H4B,TR11
Genomic distribution of SEs associated with HIST2H3D
Genome Browser

The strength of the tissue affected by the gene

Expression of HIST2H3D

Cell line (ENCODE) Primary cell (ENCODE)Tissue (NCBI) Normal tissue (GTEx) Cell line (CCLE)