SEdb 2.0
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Gene overview

Strategies/Algorithm: lasso Ensembl ID:
Gene: HIST1H2BB Gene type:
Strand: External links:
Genomic region: :- Genome Browser:

Super-enhancer search result of gene-based

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SE ID SE Region Sample ID Tissue type Biosample name SE rank Element Common SNP eQTL Risk SNP TFBS CRISPR Cas9 Gene
SE_02_098900679 chr6:25955456-25994224 Sample_02_0989 Kidney kidney cortex_WT 679 14 907 94 18 18 975 TRIM38,HIST1H2AB,HIST1H1A,SLC17A2,HIST1H3A,HIST1H4B,HIST1H2BB,HIST1H3B,HIST1H4A,HIST1H2AC,HIST1H3C,HIST1H4C,HIST1H1C,HIST1H1E
SE_02_046601159 chr6:25959015-25993617 Sample_02_0466 Adipose visceral adipocytes 1159 17 797 73 11 18 975 TRIM38,HIST1H2AB,HIST1H4B,SLC17A2,HIST1H1A,HIST1H3A,HIST1H3B,HIST1H4A,HIST1H3C,HIST1H1C,HIST1H2BB
SE_02_073900088 chr6:26019674-26037360 Sample_02_0739 Blood Nalm6 88 1 633 46 14 74 530 HIST1H4A,HIST1H3B,HIST1H4B,HIST1H2AB,HIST1H3A,HFE,HIST1H3C,HIST1H1C,HIST1H1A,HIST1H2BB,HIST1H2AC,HIST1H2BC,HIST1H2AE
SE_02_088500837 chr6:26024221-26032024 Sample_02_0885 Blood NALM6_2 837 1 280 18 7 22 166 HIST1H3B,HIST1H4B,HIST1H2AB,HIST1H3C,HIST1H1A,HIST1H3A,HIST1H1C,HIST1H2BB,HIST1H4A,HIST1H2AC,HIST1H2BC,HIST1H2AE,HFE
SE_02_094100522 chr6:26024684-26030550 Sample_02_0941 Brain T98G 522 1 213 11 4 11 95 HIST1H4B,HIST1H2AB,HIST1H3C,HIST1H1A,HIST1H3A,HIST1H1C,HIST1H2BB,HIST1H3B,HIST1H4A,HIST1H2AC,HIST1H2BI,HIST1H2BC,HIST1H3G,HIST1H4C,HIST1H4H,TRIM38,HFE
SE_04_000200381 chr6:26050698-26071985 Sample_04_0002 Blood cold shocked K562 381 4 620 51 9 28 178 HIST1H1C,HFE,HIST1H2AB,HIST1H3C,HIST1H1A,HIST1H3A,HIST1H1T,HIST1H4B,HIST1H2BB,HIST1H4C,HIST1H3B,HIST1H4A,BTN2A2,HIST1H1E,HIST1H2AC
SE_02_113000514 chr6:26051315-26071777 Sample_02_1130 Haematopoietic and lymphoid tissue bone marrow K562_??Np63?? expressing 514 3 602 49 9 28 178 HIST1H1C,HFE,HIST1H2AB,HIST1H3C,HIST1H1A,HIST1H3A,HIST1H1T,HIST1H4B,HIST1H2BB,HIST1H4C,HIST1H3B,HIST1H4A,BTN2A2,HIST1H1E,HIST1H2AC
SE_02_111600643 chr6:26051505-26071668 Sample_02_1116 Haematopoietic and lymphoid tissue bone marrow K562_native 643 5 591 49 9 28 178 HIST1H1C,HFE,HIST1H2AB,HIST1H3C,HIST1H1A,HIST1H3A,HIST1H1T,HIST1H4B,HIST1H2BB,HIST1H4C,HIST1H3B,HIST1H4A,BTN2A2,HIST1H1E,HIST1H2AC
SE_02_054500453 chr6:26051551-26071622 Sample_02_0545 Bone marrow K562 WT 453 4 588 49 9 28 178 HIST1H1C,HFE,HIST1H2AB,HIST1H3C,HIST1H1A,HIST1H3A,HIST1H1T,HIST1H4B,HIST1H2BB,HIST1H4C,HIST1H3B,HIST1H4A,BTN2A2,HIST1H1E,HIST1H2AC
SE_02_122901264 chr6:26051657-26071864 Sample_02_1229 Haematopoietic and lymphoid tissue bone marrow K562_Control 1264 8 595 50 9 28 178 HIST1H1C,HFE,HIST1H2AB,HIST1H3C,HIST1H1A,HIST1H3A,HIST1H1T,HIST1H4B,HIST1H2BB,HIST1H4C,HIST1H3B,HIST1H4A,BTN2A2,HIST1H1E,HIST1H2AC
SE_01_003900654 chr6:26052372-26066616 Sample_01_0039 Haematopoietic and lymphoid tissue bone marrow K562 654 3 448 34 6 28 178 HIST1H1C,HIST1H3B,HIST1H1A,HIST1H4A,HFE,HIST1H3C,HIST1H4B,HIST1H2AB,HIST1H1T,HIST1H3A,HIST1H2BB,HIST1H4C,BTN2A2,HIST1H1E,HIST1H2AC
SE_02_054600307 chr6:26052759-26058666 Sample_02_0546 Bone marrow K562_MYO1D Non-hub KO 307 2 277 16 3 22 178 HIST1H1C,HFE,HIST1H2AB,HIST1H3C,HIST1H1A,HIST1H3A,HIST1H1T,HIST1H4B,HIST1H2BB,HIST1H4C,HIST1H3B,HIST1H4A,BTN2A2,HIST1H1E,HIST1H2AC
SE_02_098800885 chr6:26054096-26071694 Sample_02_0988 Blood K562_EPZ 885 3 521 42 9 28 178 HIST1H1C,HFE,HIST1H2AB,HIST1H3C,HIST1H1A,HIST1H3A,HIST1H1T,HIST1H4B,HIST1H2BB,HIST1H4C,HIST1H3B,HIST1H4A,BTN2A2,HIST1H1E,HIST1H2AC
SE_00_003101044 chr6:26109773-26131676 Sample_00_0031 Placenta placenta 1044 3 621 101 28 55 283 HIST1H2AC,HIST1H2BC,HIST1H2BD,HFE,HIST1H1T,HIST1H1E,HIST1H4C,HIST1H1C,HIST1H2BB
SE_00_004500058 chr6:26114860-26128746 Sample_00_0045 Thymus thymus 58 3 433 60 19 53 249 HIST1H2AC,HIST1H2BC,HIST1H2BD,HFE,HIST1H1T,HIST1H1E,HIST1H4C,HIST1H1C,HIST1H1D,HIST1H2AB,HIST1H2AD,HIST1H2AE,HIST1H2BB,HIST1H2BE,HIST1H2BF,HIST1H2BG,HIST1H2BH,HIST1H3A,HIST1H3B,HIST1H3C,HIST1H3D,HIST1H3F,HIST1H4A,HIST1H4B,HIST1H4D,HIST1H4E
SE_02_072300420 chr6:26117878-26129135 Sample_02_0723 Pancreas MIAPaca2 WT 420 1 376 56 17 53 227 HIST1H2AC,HIST1H2BC,HFE,HIST1H2BD,HIST1H1E,HIST1H1T,HIST1H4C,HIST1H2AB,HIST1H2BG,HIST1H2BE,HIST1H3B,HIST1H4A,HIST1H1C,HIST1H1D,HIST1H2BB
SE_02_120501018 chr6:26118488-26144052 Sample_02_1205 Brain NB3 1018 9 753 92 24 72 340 HIST1H2AC,HIST1H2BC,HFE,HIST1H2BE,HIST1H4D,HIST1H2BD,HIST1H1E,HIST1H1T,HIST1H4C,HIST1H2AB,HIST1H2BG,HIST1H2BF,HIST1H2BH,HIST1H2BI,HIST1H3D,HIST1H3C,HIST1H3E,HIST1H3B,HIST1H4E,HIST1H1C,HIST1H1D,HIST1H1A,HIST1H3F,HIST1H2AE,HIST1H2BB
SE_02_071600227 chr6:26118553-26127918 Sample_02_0716 Pancreas SUIT2_GFP 227 4 332 44 14 53 227 HIST1H2AC,HIST1H2BC,HFE,HIST1H2BD,HIST1H1E,HIST1H1T,HIST1H4C,HIST1H2AB,HIST1H2BF,HIST1H2BE,HIST1H3D,HIST1H3C,HIST1H4D,HIST1H4F,HIST1H4H,HIST1H4B,HIST1H1C,TRIM38,HIST1H3F,HIST1H2BB
SE_02_071900288 chr6:26118693-26127552 Sample_02_0719 Pancreas SUIT2_TP63dN_DOX 288 4 324 42 13 52 227 HIST1H2AC,HIST1H2BC,HFE,HIST1H2BD,HIST1H1E,HIST1H1T,HIST1H4C,HIST1H2AB,HIST1H2BF,HIST1H2BE,HIST1H3D,HIST1H3C,HIST1H4D,HIST1H4F,HIST1H4H,HIST1H4B,HIST1H1C,TRIM38,HIST1H3F,HIST1H2BB
SE_02_071400219 chr6:26118853-26127696 Sample_02_0714 Pancreas SUIT2_MTV 219 4 320 43 13 53 227 HIST1H2AC,HIST1H2BC,HFE,HIST1H2BD,HIST1H1E,HIST1H1T,HIST1H4C,HIST1H2AB,HIST1H2BF,HIST1H2BE,HIST1H3D,HIST1H3C,HIST1H4D,HIST1H4F,HIST1H4H,HIST1H4B,HIST1H1C,TRIM38,HIST1H3F,HIST1H2BB
SE_02_071500359 chr6:26119435-26127648 Sample_02_0715 Pancreas SUIT2_TP63dN 359 2 305 40 12 52 227 HIST1H2AC,HIST1H2BC,HFE,HIST1H2BD,HIST1H1E,HIST1H1T,HIST1H4C,HIST1H2AB,HIST1H2BF,HIST1H2BE,HIST1H3D,HIST1H3C,HIST1H4D,HIST1H4F,HIST1H4H,HIST1H4B,HIST1H1C,TRIM38,HIST1H3F,HIST1H2BB
SE_02_098900707 chr6:26120147-26128697 Sample_02_0989 Kidney kidney cortex_WT 707 1 314 46 14 51 227 HIST1H2AC,HIST1H2BC,HFE,HIST1H2BD,HIST1H1E,HIST1H1T,HIST1H4C,HIST1H2AB,HIST1H2BF,HIST1H2BE,HIST1H2BI,HIST1H3A,HIST1H3D,HIST1H3C,HIST1H3G,HIST1H3B,HIST1H4A,HIST1H4D,HIST1H4H,HIST1H4B,HIST1H4E,HIST1H1C,HIST1H1D,HIST1H1A,TRIM38,HIST1H3F,HIST1H2AE,HIST1H2BB
SE_02_070600277 chr6:26120171-26127599 Sample_02_0706 Pancreas SUIT2 WT 277 5 288 37 12 50 227 HIST1H2AC,HIST1H2BC,HFE,HIST1H2BD,HIST1H1E,HIST1H1T,HIST1H4C,HIST1H2AB,HIST1H2BF,HIST1H2BE,HIST1H3D,HIST1H3C,HIST1H4D,HIST1H4F,HIST1H4H,HIST1H4B,HIST1H1C,TRIM38,HIST1H3F,HIST1H2BB
SE_00_005500213 chr6:26122367-26126857 Sample_00_0055 Spleen spleen 34y 213 1 200 23 5 49 227 HIST1H2AC,HIST1H2BC,HFE,HIST1H2BD,HIST1H1E,HIST1H1T,HIST1H4C,BTN2A2,BTN3A2,HIST1H2AB,HIST1H2BG,HIST1H2BE,HIST1H3A,HIST1H3D,HIST1H3E,HIST1H3B,HIST1H4A,HIST1H4H,HIST1H4B,HIST1H4E,HIST1H1C,HIST1H1D,HIST1H1A,TRIM38,HIST1H2AE,HIST1H2BB
Genomic distribution of SEs associated with HIST1H2BB
Genome Browser

The strength of the tissue affected by the gene

Expression of HIST1H2BB

Cell line (ENCODE) Primary cell (ENCODE)Tissue (NCBI) Normal tissue (GTEx) Cell line (CCLE)