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Gene overview

Strategies/Algorithm: lasso Ensembl ID:
Gene: HIST1H2AC Gene type:
Strand: External links:
Genomic region: :- Genome Browser:

Super-enhancer search result of gene-based

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SE ID SE Region Sample ID Tissue type Biosample name SE rank Element Common SNP eQTL Risk SNP TFBS CRISPR Cas9 Gene
SE_02_098900679 chr6:25955456-25994224 Sample_02_0989 Kidney kidney cortex_WT 679 14 907 94 18 18 975 TRIM38,HIST1H2AB,HIST1H1A,SLC17A2,HIST1H3A,HIST1H4B,HIST1H2BB,HIST1H3B,HIST1H4A,HIST1H2AC,HIST1H3C,HIST1H4C,HIST1H1C,HIST1H1E
SE_02_073900088 chr6:26019674-26037360 Sample_02_0739 Blood Nalm6 88 1 633 46 14 74 530 HIST1H4A,HIST1H3B,HIST1H4B,HIST1H2AB,HIST1H3A,HFE,HIST1H3C,HIST1H1C,HIST1H1A,HIST1H2BB,HIST1H2AC,HIST1H2BC,HIST1H2AE
SE_02_088500837 chr6:26024221-26032024 Sample_02_0885 Blood NALM6_2 837 1 280 18 7 22 166 HIST1H3B,HIST1H4B,HIST1H2AB,HIST1H3C,HIST1H1A,HIST1H3A,HIST1H1C,HIST1H2BB,HIST1H4A,HIST1H2AC,HIST1H2BC,HIST1H2AE,HFE
SE_02_094100522 chr6:26024684-26030550 Sample_02_0941 Brain T98G 522 1 213 11 4 11 95 HIST1H4B,HIST1H2AB,HIST1H3C,HIST1H1A,HIST1H3A,HIST1H1C,HIST1H2BB,HIST1H3B,HIST1H4A,HIST1H2AC,HIST1H2BI,HIST1H2BC,HIST1H3G,HIST1H4C,HIST1H4H,TRIM38,HFE
SE_00_004500138 chr6:26042781-26047241 Sample_00_0045 Thymus thymus 138 1 163 18 3 27 196 HIST1H2BB,HIST1H3C,HIST1H3B,HIST1H4B,HIST1H4A,HFE,HIST1H1A,HIST1H2AB,HIST1H1C,HIST1H3A,HIST1H1E,HIST1H1T,HIST1H2AC,HIST1H2AD,HIST1H2AE,HIST1H2BC,HIST1H2BD,HIST1H2BE,HIST1H3D,HIST1H4C,TRI38
SE_04_000200381 chr6:26050698-26071985 Sample_04_0002 Blood cold shocked K562 381 4 620 51 9 28 178 HIST1H1C,HFE,HIST1H2AB,HIST1H3C,HIST1H1A,HIST1H3A,HIST1H1T,HIST1H4B,HIST1H2BB,HIST1H4C,HIST1H3B,HIST1H4A,BTN2A2,HIST1H1E,HIST1H2AC
SE_02_113000514 chr6:26051315-26071777 Sample_02_1130 Haematopoietic and lymphoid tissue bone marrow K562_??Np63?? expressing 514 3 602 49 9 28 178 HIST1H1C,HFE,HIST1H2AB,HIST1H3C,HIST1H1A,HIST1H3A,HIST1H1T,HIST1H4B,HIST1H2BB,HIST1H4C,HIST1H3B,HIST1H4A,BTN2A2,HIST1H1E,HIST1H2AC
SE_02_111600643 chr6:26051505-26071668 Sample_02_1116 Haematopoietic and lymphoid tissue bone marrow K562_native 643 5 591 49 9 28 178 HIST1H1C,HFE,HIST1H2AB,HIST1H3C,HIST1H1A,HIST1H3A,HIST1H1T,HIST1H4B,HIST1H2BB,HIST1H4C,HIST1H3B,HIST1H4A,BTN2A2,HIST1H1E,HIST1H2AC
SE_02_054500453 chr6:26051551-26071622 Sample_02_0545 Bone marrow K562 WT 453 4 588 49 9 28 178 HIST1H1C,HFE,HIST1H2AB,HIST1H3C,HIST1H1A,HIST1H3A,HIST1H1T,HIST1H4B,HIST1H2BB,HIST1H4C,HIST1H3B,HIST1H4A,BTN2A2,HIST1H1E,HIST1H2AC
SE_02_122901264 chr6:26051657-26071864 Sample_02_1229 Haematopoietic and lymphoid tissue bone marrow K562_Control 1264 8 595 50 9 28 178 HIST1H1C,HFE,HIST1H2AB,HIST1H3C,HIST1H1A,HIST1H3A,HIST1H1T,HIST1H4B,HIST1H2BB,HIST1H4C,HIST1H3B,HIST1H4A,BTN2A2,HIST1H1E,HIST1H2AC
SE_01_003900654 chr6:26052372-26066616 Sample_01_0039 Haematopoietic and lymphoid tissue bone marrow K562 654 3 448 34 6 28 178 HIST1H1C,HIST1H3B,HIST1H1A,HIST1H4A,HFE,HIST1H3C,HIST1H4B,HIST1H2AB,HIST1H1T,HIST1H3A,HIST1H2BB,HIST1H4C,BTN2A2,HIST1H1E,HIST1H2AC
SE_02_054600307 chr6:26052759-26058666 Sample_02_0546 Bone marrow K562_MYO1D Non-hub KO 307 2 277 16 3 22 178 HIST1H1C,HFE,HIST1H2AB,HIST1H3C,HIST1H1A,HIST1H3A,HIST1H1T,HIST1H4B,HIST1H2BB,HIST1H4C,HIST1H3B,HIST1H4A,BTN2A2,HIST1H1E,HIST1H2AC
SE_02_098800885 chr6:26054096-26071694 Sample_02_0988 Blood K562_EPZ 885 3 521 42 9 28 178 HIST1H1C,HFE,HIST1H2AB,HIST1H3C,HIST1H1A,HIST1H3A,HIST1H1T,HIST1H4B,HIST1H2BB,HIST1H4C,HIST1H3B,HIST1H4A,BTN2A2,HIST1H1E,HIST1H2AC
SE_00_003101044 chr6:26109773-26131676 Sample_00_0031 Placenta placenta 1044 3 621 101 28 55 283 HIST1H2AC,HIST1H2BC,HIST1H2BD,HFE,HIST1H1T,HIST1H1E,HIST1H4C,HIST1H1C,HIST1H2BB
SE_02_066000448 chr6:26110165-26128392 Sample_02_0660 Mammary gland MCF10DCIS 448 4 524 86 26 54 283 HIST1H2AC,HIST1H2BC,HFE,HIST1H2BD,HIST1H1E,HIST1H1T,HIST1H4C,HIST1H2BE
SE_00_004500058 chr6:26114860-26128746 Sample_00_0045 Thymus thymus 58 3 433 60 19 53 249 HIST1H2AC,HIST1H2BC,HIST1H2BD,HFE,HIST1H1T,HIST1H1E,HIST1H4C,HIST1H1C,HIST1H1D,HIST1H2AB,HIST1H2AD,HIST1H2AE,HIST1H2BB,HIST1H2BE,HIST1H2BF,HIST1H2BG,HIST1H2BH,HIST1H3A,HIST1H3B,HIST1H3C,HIST1H3D,HIST1H3F,HIST1H4A,HIST1H4B,HIST1H4D,HIST1H4E
SE_02_072300420 chr6:26117878-26129135 Sample_02_0723 Pancreas MIAPaca2 WT 420 1 376 56 17 53 227 HIST1H2AC,HIST1H2BC,HFE,HIST1H2BD,HIST1H1E,HIST1H1T,HIST1H4C,HIST1H2AB,HIST1H2BG,HIST1H2BE,HIST1H3B,HIST1H4A,HIST1H1C,HIST1H1D,HIST1H2BB
SE_02_066100323 chr6:26117993-26128049 Sample_02_0661 Mammary gland MCF10DCIS-TetTCF7 323 5 346 49 15 53 227 HIST1H2AC,HIST1H2BC,HFE,HIST1H2BD,HIST1H1E,HIST1H1T,HIST1H4C,HIST1H2BE
SE_02_120501018 chr6:26118488-26144052 Sample_02_1205 Brain NB3 1018 9 753 92 24 72 340 HIST1H2AC,HIST1H2BC,HFE,HIST1H2BE,HIST1H4D,HIST1H2BD,HIST1H1E,HIST1H1T,HIST1H4C,HIST1H2AB,HIST1H2BG,HIST1H2BF,HIST1H2BH,HIST1H2BI,HIST1H3D,HIST1H3C,HIST1H3E,HIST1H3B,HIST1H4E,HIST1H1C,HIST1H1D,HIST1H1A,HIST1H3F,HIST1H2AE,HIST1H2BB
SE_02_071600227 chr6:26118553-26127918 Sample_02_0716 Pancreas SUIT2_GFP 227 4 332 44 14 53 227 HIST1H2AC,HIST1H2BC,HFE,HIST1H2BD,HIST1H1E,HIST1H1T,HIST1H4C,HIST1H2AB,HIST1H2BF,HIST1H2BE,HIST1H3D,HIST1H3C,HIST1H4D,HIST1H4F,HIST1H4H,HIST1H4B,HIST1H1C,TRIM38,HIST1H3F,HIST1H2BB
SE_02_071900288 chr6:26118693-26127552 Sample_02_0719 Pancreas SUIT2_TP63dN_DOX 288 4 324 42 13 52 227 HIST1H2AC,HIST1H2BC,HFE,HIST1H2BD,HIST1H1E,HIST1H1T,HIST1H4C,HIST1H2AB,HIST1H2BF,HIST1H2BE,HIST1H3D,HIST1H3C,HIST1H4D,HIST1H4F,HIST1H4H,HIST1H4B,HIST1H1C,TRIM38,HIST1H3F,HIST1H2BB
SE_02_071400219 chr6:26118853-26127696 Sample_02_0714 Pancreas SUIT2_MTV 219 4 320 43 13 53 227 HIST1H2AC,HIST1H2BC,HFE,HIST1H2BD,HIST1H1E,HIST1H1T,HIST1H4C,HIST1H2AB,HIST1H2BF,HIST1H2BE,HIST1H3D,HIST1H3C,HIST1H4D,HIST1H4F,HIST1H4H,HIST1H4B,HIST1H1C,TRIM38,HIST1H3F,HIST1H2BB
SE_02_071500359 chr6:26119435-26127648 Sample_02_0715 Pancreas SUIT2_TP63dN 359 2 305 40 12 52 227 HIST1H2AC,HIST1H2BC,HFE,HIST1H2BD,HIST1H1E,HIST1H1T,HIST1H4C,HIST1H2AB,HIST1H2BF,HIST1H2BE,HIST1H3D,HIST1H3C,HIST1H4D,HIST1H4F,HIST1H4H,HIST1H4B,HIST1H1C,TRIM38,HIST1H3F,HIST1H2BB
SE_02_098900707 chr6:26120147-26128697 Sample_02_0989 Kidney kidney cortex_WT 707 1 314 46 14 51 227 HIST1H2AC,HIST1H2BC,HFE,HIST1H2BD,HIST1H1E,HIST1H1T,HIST1H4C,HIST1H2AB,HIST1H2BF,HIST1H2BE,HIST1H2BI,HIST1H3A,HIST1H3D,HIST1H3C,HIST1H3G,HIST1H3B,HIST1H4A,HIST1H4D,HIST1H4H,HIST1H4B,HIST1H4E,HIST1H1C,HIST1H1D,HIST1H1A,TRIM38,HIST1H3F,HIST1H2AE,HIST1H2BB
SE_02_070600277 chr6:26120171-26127599 Sample_02_0706 Pancreas SUIT2 WT 277 5 288 37 12 50 227 HIST1H2AC,HIST1H2BC,HFE,HIST1H2BD,HIST1H1E,HIST1H1T,HIST1H4C,HIST1H2AB,HIST1H2BF,HIST1H2BE,HIST1H3D,HIST1H3C,HIST1H4D,HIST1H4F,HIST1H4H,HIST1H4B,HIST1H1C,TRIM38,HIST1H3F,HIST1H2BB
SE_02_088001265 chr6:26120603-26127581 Sample_02_0880 Ovary SVOG3e cells_noDox_transduced_V5-FOXL2_WT 1265 2 276 36 12 50 227 HIST1H2AC,HIST1H2BC,HFE,HIST1H2BD,HIST1H1E,HIST1H1T,HIST1H4C,HIST1H2AB,HIST1H2BG,HIST1H2BF,HIST1H2BH,HIST1H3A,HIST1H3B,HIST1H2AE
SE_02_087801443 chr6:26120816-26127370 Sample_02_0878 Ovary SVOG3e cells_noDox_control 1443 1 265 34 10 50 227 HIST1H2AC,HIST1H2BC,HFE,HIST1H2BD,HIST1H1E,HIST1H1T,HIST1H4C,HIST1H2AB,HIST1H2BG,HIST1H2BF,HIST1H2BH,HIST1H3A,HIST1H3B,HIST1H2AE
SE_02_132000690 chr6:26121199-26140549 Sample_02_1320 Connective Tissue HT1080_EWS-FLI1 690 10 598 78 19 58 340 HIST1H2AC,HIST1H2BC,HFE,HIST1H2BE,HIST1H4D,HIST1H2BD,HIST1H1E,HIST1H1T,HIST1H4C,HIST1H2BG,HIST1H2BF,HIST1H2BH,HIST1H2BI,HIST1H3C,HIST1H3E,HIST1H3G,HIST1H4F,HIST1H4B,HIST1H4E,HIST1H1D,HIST1H3F,HIST1H2AE
SE_02_132201494 chr6:26121628-26126778 Sample_02_1322 Connective Tissue HT1080_WT 1494 2 219 27 7 49 227 HIST1H2AC,HIST1H2BC,HFE,HIST1H2BD,HIST1H1E,HIST1H1T,HIST1H4C,HIST1H2BG,HIST1H2BF,HIST1H2BE,HIST1H2BH,HIST1H2BI,HIST1H3C,HIST1H3E,HIST1H3G,HIST1H4D,HIST1H4F,HIST1H4B,HIST1H4E,HIST1H1D,HIST1H3F,HIST1H2AE
SE_02_108200664 chr6:26121713-26128309 Sample_02_1082 Retina retina 664 2 263 37 11 51 227 HIST1H2AC,HIST1H2BC,HFE,HIST1H2BD,HIST1H1E,HIST1H1T,HIST1H4C,HIST1H2BI,HIST1H3A,HIST1H4B
SE_01_010500821 chr6:26124097-26142835 Sample_01_0105 Thyroid gland thyroid gland_54y 821 7 534 65 15 47 225 HIST1H2AC,HFE,HIST1H2BE,HIST1H4D,HIST1H2BC,HIST1H2BD,HIST1H1E,HIST1H1T,HIST1H4C,HIST1H2AB,HIST1H2BG,HIST1H2BF,HIST1H2BH,HIST1H2BI,HIST1H3A,HIST1H3D,HIST1H3C,HIST1H3E,HIST1H3G,HIST1H3B,HIST1H4A,HIST1H4F,HIST1H4H,HIST1H4B,HIST1H4E,HIST1H4G,HIST1H1C,HIST1H1D,HIST1H1A,TRIM38,HIST1H3
SE_01_003900587 chr6:26155143-26174186 Sample_01_0039 Haematopoietic and lymphoid tissue bone marrow K562 587 3 623 35 7 15 361 HIST1H2BD,HIST1H1E,HIST1H2BG,HIST1H4D,HIST1H2AC,HIST1H2BE,HIST1H3D,HIST1H2BC,HIST1H4E,HIST1H2BF,HIST1H2AE,HIST1H1T,HIST1H2AD,HIST1H2AH,HIST1H2BH,HIST1H2BK,HIST1H3F,HIST1H4C,HIST1H1D
SE_00_003900243 chr6:26194179-26200685 Sample_00_0039 Spleen spleen_3y 243 1 286 39 3 0 328 HIST1H2BF,HIST1H3D,HIST1H2AD,HIST1H2BG,HIST1H4D,HIST1H3F,HIST1H4G,HIST1H3E,HIST1H2BE,HIST1H4E,HIST1H2AE,HIST1H2BD,HIST1H4F,HIST1H1D,HIST1H1E,HIST1H1T,HIST1H2AC,HIST1H2BC
SE_04_000200033 chr6:27126074-27151177 Sample_04_0002 Blood cold shocked K562 33 1 762 47 2 102 808 HIST1H2BK,HIST1H4I,HIST1H2AG,MIR3143,HIST1H2AH,HIST1H2BJ,ZNF184,ABT1,HIST1H2BD,HIST1H4H,POM121L2,HIST1H2AE,HIST1H1E,HIST1H2AC,HIST1H2BC,HIST1H2AJ,HIST1H2AK,HIST1H1B,HIST1H2BL,HIST1H2BG,HIST1H4D,HIST1H2BO,HIST1H2BM,HIST1H2AI,HIST1H2AD,HIST1H3J,HIST1H4J,HIST1H3D,HIST1H2BF,HIST1H4K,HIST1H2AL,HIST1H4E,HIST1H3H,HIST
SE_04_000100142 chr6:27126633-27150500 Sample_04_0001 Blood heat shocked K562 142 1 737 45 2 102 745 HIST1H2BK,HIST1H4I,HIST1H2AG,MIR3143,HIST1H2AH,HIST1H2BJ,ZNF184,ABT1,HIST1H2BD,HIST1H4H,POM121L2,HIST1H2AE,HIST1H1E,HIST1H2AC,HIST1H2BC,HIST1H2AJ,HIST1H2AK,HIST1H1B,HIST1H2BL,HIST1H2BG,HIST1H4D,HIST1H2BO,HIST1H2BM,HIST1H2AI,HIST1H2AD,HIST1H3J,HIST1H4J,HIST1H3D,HIST1H2BF,HIST1H4K,HIST1H2AL,HIST1H4E,HIST1H3H,HIST
SE_01_003900577 chr6:27144655-27148264 Sample_01_0039 Haematopoietic and lymphoid tissue bone marrow K562 577 1 162 14 1 49 223 HIST1H2BK,HIST1H2AH,MIR3143,HIST1H2AG,HIST1H4I,HIST1H2BJ,ABT1,HIST1H1B,HIST1H1E,HIST1H2AC,HIST1H2AD,HIST1H2AE,HIST1H2AI,HIST1H2AJ,HIST1H2AK,HIST1H2AL,HIST1H2A,HIST1H2BC,HIST1H2BD,HIST1H2BF,HIST1H2BG,HIST1H2BL,HIST1H2B,HIST1H2BN,HIST1H2BO,HIST1H3D,HIST1H3H,HIST1H3J,HIST1H4D,HIST1H4E,HIST1H4H
Genomic distribution of SEs associated with HIST1H2AC
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The strength of the tissue affected by the gene

Expression of HIST1H2AC

Cell line (ENCODE) Primary cell (ENCODE)Tissue (NCBI) Normal tissue (GTEx) Cell line (CCLE)