SEdb 2.0
  1. Search
  2. Super-enhancer search result of gene-based

Gene overview

Strategies/Algorithm: lasso Ensembl ID:
Gene: HIST1H1T Gene type:
Strand: External links:
Genomic region: :- Genome Browser:

Super-enhancer search result of gene-based

GREAT Download bed
SE ID SE Region Sample ID Tissue type Biosample name SE rank Element Common SNP eQTL Risk SNP TFBS CRISPR Cas9 Gene
SE_00_002100310 chr6:26015974-26045286 Sample_00_0021 Lung lung_3y 310 6 989 80 18 110 805 HIST1H2BB,HIST1H4B,HIST1H3B,HIST1H2AB,HIST1H3A,HIST1H1A,HIST1H4A,HFE,HIST1H3C,HIST1H1C,HIST1H1T
SE_00_002200385 chr6:26017138-26045918 Sample_00_0022 Lung lung_30y 385 7 987 78 17 115 854 HIST1H2BB,HIST1H4B,HIST1H3B,HIST1H2AB,HIST1H3A,HIST1H1A,HIST1H3C,HIST1H4A,HFE,HIST1H1C,HIST1H1T
SE_00_004000032 chr6:26017170-26045912 Sample_00_0040 Spleen spleen_30y 32 5 982 78 17 115 845 HIST1H2BB,HIST1H4B,HIST1H3B,HIST1H2AB,HIST1H3A,HIST1H1A,HIST1H3C,HIST1H4A,HFE,HIST1H1C,HIST1H1T,HIST1H2BC,SLC17A2
SE_00_004500138 chr6:26042781-26047241 Sample_00_0045 Thymus thymus 138 1 163 18 3 27 196 HIST1H2BB,HIST1H3C,HIST1H3B,HIST1H4B,HIST1H4A,HFE,HIST1H1A,HIST1H2AB,HIST1H1C,HIST1H3A,HIST1H1E,HIST1H1T,HIST1H2AC,HIST1H2AD,HIST1H2AE,HIST1H2BC,HIST1H2BD,HIST1H2BE,HIST1H3D,HIST1H4C,TRI38
SE_00_003900938 chr6:26042929-26046181 Sample_00_0039 Spleen spleen_3y 938 1 144 14 2 27 196 HIST1H2BB,HIST1H3C,HIST1H3B,HIST1H4B,HIST1H4A,HFE,HIST1H1A,HIST1H2AB,HIST1H1C,HIST1H3A,HIST1H1T,HIST1H2BC,SLC17A2
SE_04_000200381 chr6:26050698-26071985 Sample_04_0002 Blood cold shocked K562 381 4 620 51 9 28 178 HIST1H1C,HFE,HIST1H2AB,HIST1H3C,HIST1H1A,HIST1H3A,HIST1H1T,HIST1H4B,HIST1H2BB,HIST1H4C,HIST1H3B,HIST1H4A,BTN2A2,HIST1H1E,HIST1H2AC
SE_02_113000514 chr6:26051315-26071777 Sample_02_1130 Haematopoietic and lymphoid tissue bone marrow K562_??Np63?? expressing 514 3 602 49 9 28 178 HIST1H1C,HFE,HIST1H2AB,HIST1H3C,HIST1H1A,HIST1H3A,HIST1H1T,HIST1H4B,HIST1H2BB,HIST1H4C,HIST1H3B,HIST1H4A,BTN2A2,HIST1H1E,HIST1H2AC
SE_02_111600643 chr6:26051505-26071668 Sample_02_1116 Haematopoietic and lymphoid tissue bone marrow K562_native 643 5 591 49 9 28 178 HIST1H1C,HFE,HIST1H2AB,HIST1H3C,HIST1H1A,HIST1H3A,HIST1H1T,HIST1H4B,HIST1H2BB,HIST1H4C,HIST1H3B,HIST1H4A,BTN2A2,HIST1H1E,HIST1H2AC
SE_02_054500453 chr6:26051551-26071622 Sample_02_0545 Bone marrow K562 WT 453 4 588 49 9 28 178 HIST1H1C,HFE,HIST1H2AB,HIST1H3C,HIST1H1A,HIST1H3A,HIST1H1T,HIST1H4B,HIST1H2BB,HIST1H4C,HIST1H3B,HIST1H4A,BTN2A2,HIST1H1E,HIST1H2AC
SE_02_122901264 chr6:26051657-26071864 Sample_02_1229 Haematopoietic and lymphoid tissue bone marrow K562_Control 1264 8 595 50 9 28 178 HIST1H1C,HFE,HIST1H2AB,HIST1H3C,HIST1H1A,HIST1H3A,HIST1H1T,HIST1H4B,HIST1H2BB,HIST1H4C,HIST1H3B,HIST1H4A,BTN2A2,HIST1H1E,HIST1H2AC
SE_01_003900654 chr6:26052372-26066616 Sample_01_0039 Haematopoietic and lymphoid tissue bone marrow K562 654 3 448 34 6 28 178 HIST1H1C,HIST1H3B,HIST1H1A,HIST1H4A,HFE,HIST1H3C,HIST1H4B,HIST1H2AB,HIST1H1T,HIST1H3A,HIST1H2BB,HIST1H4C,BTN2A2,HIST1H1E,HIST1H2AC
SE_02_054600307 chr6:26052759-26058666 Sample_02_0546 Bone marrow K562_MYO1D Non-hub KO 307 2 277 16 3 22 178 HIST1H1C,HFE,HIST1H2AB,HIST1H3C,HIST1H1A,HIST1H3A,HIST1H1T,HIST1H4B,HIST1H2BB,HIST1H4C,HIST1H3B,HIST1H4A,BTN2A2,HIST1H1E,HIST1H2AC
SE_02_098800885 chr6:26054096-26071694 Sample_02_0988 Blood K562_EPZ 885 3 521 42 9 28 178 HIST1H1C,HFE,HIST1H2AB,HIST1H3C,HIST1H1A,HIST1H3A,HIST1H1T,HIST1H4B,HIST1H2BB,HIST1H4C,HIST1H3B,HIST1H4A,BTN2A2,HIST1H1E,HIST1H2AC
SE_00_003101044 chr6:26109773-26131676 Sample_00_0031 Placenta placenta 1044 3 621 101 28 55 283 HIST1H2AC,HIST1H2BC,HIST1H2BD,HFE,HIST1H1T,HIST1H1E,HIST1H4C,HIST1H1C,HIST1H2BB
SE_02_066000448 chr6:26110165-26128392 Sample_02_0660 Mammary gland MCF10DCIS 448 4 524 86 26 54 283 HIST1H2AC,HIST1H2BC,HFE,HIST1H2BD,HIST1H1E,HIST1H1T,HIST1H4C,HIST1H2BE
SE_00_004500058 chr6:26114860-26128746 Sample_00_0045 Thymus thymus 58 3 433 60 19 53 249 HIST1H2AC,HIST1H2BC,HIST1H2BD,HFE,HIST1H1T,HIST1H1E,HIST1H4C,HIST1H1C,HIST1H1D,HIST1H2AB,HIST1H2AD,HIST1H2AE,HIST1H2BB,HIST1H2BE,HIST1H2BF,HIST1H2BG,HIST1H2BH,HIST1H3A,HIST1H3B,HIST1H3C,HIST1H3D,HIST1H3F,HIST1H4A,HIST1H4B,HIST1H4D,HIST1H4E
SE_02_054500290 chr6:26117827-26128389 Sample_02_0545 Bone marrow K562 WT 290 5 358 53 16 53 227 HIST1H2AC,HIST1H2BC,HFE,HIST1H2BD,HIST1H1E,HIST1H1T,HIST1H4C,HIST1H4H,HIST1H2AG,HIST1H2AH
SE_04_000200424 chr6:26117982-26128855 Sample_04_0002 Blood cold shocked K562 424 1 367 56 17 53 227 HIST1H2AC,HIST1H2BC,HFE,HIST1H2BD,HIST1H1E,HIST1H1T,HIST1H4C,HIST1H4H,HIST1H2AG,HIST1H2AH
SE_02_066100323 chr6:26117993-26128049 Sample_02_0661 Mammary gland MCF10DCIS-TetTCF7 323 5 346 49 15 53 227 HIST1H2AC,HIST1H2BC,HFE,HIST1H2BD,HIST1H1E,HIST1H1T,HIST1H4C,HIST1H2BE
SE_02_098700400 chr6:26118488-26127717 Sample_02_0987 Blood K562_Control_1 400 4 329 44 14 53 227 HIST1H2AC,HIST1H2BC,HFE,HIST1H2BD,HIST1H1E,HIST1H1T,HIST1H4C,HIST1H4H,HIST1H2AG,HIST1H2AH
SE_02_120501018 chr6:26118488-26144052 Sample_02_1205 Brain NB3 1018 9 753 92 24 72 340 HIST1H2AC,HIST1H2BC,HFE,HIST1H2BE,HIST1H4D,HIST1H2BD,HIST1H1E,HIST1H1T,HIST1H4C,HIST1H2AB,HIST1H2BG,HIST1H2BF,HIST1H2BH,HIST1H2BI,HIST1H3D,HIST1H3C,HIST1H3E,HIST1H3B,HIST1H4E,HIST1H1C,HIST1H1D,HIST1H1A,HIST1H3F,HIST1H2AE,HIST1H2BB
SE_02_103300309 chr6:26118523-26128611 Sample_02_1033 Haematopoietic and lymphoid tissue bone marrow K562 309 1 348 52 16 53 227 HIST1H2AC,HIST1H2BC,HFE,HIST1H2BD,HIST1H1E,HIST1H1T,HIST1H4C,HIST1H4H,HIST1H2AG,HIST1H2AH
SE_02_113000356 chr6:26118623-26128509 Sample_02_1130 Haematopoietic and lymphoid tissue bone marrow K562_??Np63?? expressing 356 4 345 50 15 53 227 HIST1H2AC,HIST1H2BC,HFE,HIST1H2BD,HIST1H1E,HIST1H1T,HIST1H4C,HIST1H4H,HIST1H2AG,HIST1H2AH
SE_04_000100939 chr6:26118685-26128399 Sample_04_0001 Blood heat shocked K562 939 1 340 49 14 53 227 HIST1H2AC,HIST1H2BC,HFE,HIST1H2BD,HIST1H1E,HIST1H1T,HIST1H4C,HIST1H4H,HIST1H2AG,HIST1H2AH
SE_02_054700134 chr6:26119955-26126899 Sample_02_0547 Bone marrow K562_MYO1D_Hub_KO 134 2 264 33 9 50 227 HIST1H2AC,HIST1H2BC,HFE,HIST1H2BD,HIST1H1E,HIST1H1T,HIST1H4C,HIST1H4H,HIST1H2AG,HIST1H2AH
SE_02_098900707 chr6:26120147-26128697 Sample_02_0989 Kidney kidney cortex_WT 707 1 314 46 14 51 227 HIST1H2AC,HIST1H2BC,HFE,HIST1H2BD,HIST1H1E,HIST1H1T,HIST1H4C,HIST1H2AB,HIST1H2BF,HIST1H2BE,HIST1H2BI,HIST1H3A,HIST1H3D,HIST1H3C,HIST1H3G,HIST1H3B,HIST1H4A,HIST1H4D,HIST1H4H,HIST1H4B,HIST1H4E,HIST1H1C,HIST1H1D,HIST1H1A,TRIM38,HIST1H3F,HIST1H2AE,HIST1H2BB
SE_02_111600393 chr6:26120185-26127501 Sample_02_1116 Haematopoietic and lymphoid tissue bone marrow K562_native 393 1 284 35 11 50 227 HIST1H2AC,HIST1H2BC,HFE,HIST1H2BD,HIST1H1E,HIST1H1T,HIST1H4C,HIST1H4H,HIST1H2AG,HIST1H2AH
SE_02_142400134 chr6:26120219-26128454 Sample_02_1424 Haematopoietic and lymphoid tissue bone marrow K562_Triptolide_4h 134 5 302 43 13 51 227 HIST1H2AC,HIST1H2BC,HFE,HIST1H2BD,HIST1H1E,HIST1H1T,HIST1H4C,HIST1H4H,HIST1H2AG,HIST1H2AH
SE_02_098800551 chr6:26120486-26127390 Sample_02_0988 Blood K562_EPZ 551 3 272 35 11 50 227 HIST1H2AC,HIST1H2BC,HFE,HIST1H2BD,HIST1H1E,HIST1H1T,HIST1H4C,HIST1H4H,HIST1H2AG,HIST1H2AH
SE_02_088001265 chr6:26120603-26127581 Sample_02_0880 Ovary SVOG3e cells_noDox_transduced_V5-FOXL2_WT 1265 2 276 36 12 50 227 HIST1H2AC,HIST1H2BC,HFE,HIST1H2BD,HIST1H1E,HIST1H1T,HIST1H4C,HIST1H2AB,HIST1H2BG,HIST1H2BF,HIST1H2BH,HIST1H3A,HIST1H3B,HIST1H2AE
SE_02_069400043 chr6:26120605-26126986 Sample_02_0694 Lung NCI-H82_no infection 43 3 249 33 9 49 227 HIST1H2AC,HIST1H2BC,HFE,HIST1H2BD,HIST1H1E,HIST1H1T,HIST1H4C,HIST1H2BE,HIST1H3A,HIST1H3D,HIST1H3B,HIST1H4A,HIST1H4D,HIST1H4B,HIST1H1D
SE_02_087801443 chr6:26120816-26127370 Sample_02_0878 Ovary SVOG3e cells_noDox_control 1443 1 265 34 10 50 227 HIST1H2AC,HIST1H2BC,HFE,HIST1H2BD,HIST1H1E,HIST1H1T,HIST1H4C,HIST1H2AB,HIST1H2BG,HIST1H2BF,HIST1H2BH,HIST1H3A,HIST1H3B,HIST1H2AE
SE_00_005500213 chr6:26122367-26126857 Sample_00_0055 Spleen spleen 34y 213 1 200 23 5 49 227 HIST1H2AC,HIST1H2BC,HFE,HIST1H2BD,HIST1H1E,HIST1H1T,HIST1H4C,BTN2A2,BTN3A2,HIST1H2AB,HIST1H2BG,HIST1H2BE,HIST1H3A,HIST1H3D,HIST1H3E,HIST1H3B,HIST1H4A,HIST1H4H,HIST1H4B,HIST1H4E,HIST1H1C,HIST1H1D,HIST1H1A,TRIM38,HIST1H2AE,HIST1H2BB
SE_01_010500821 chr6:26124097-26142835 Sample_01_0105 Thyroid gland thyroid gland_54y 821 7 534 65 15 47 225 HIST1H2AC,HFE,HIST1H2BE,HIST1H4D,HIST1H2BC,HIST1H2BD,HIST1H1E,HIST1H1T,HIST1H4C,HIST1H2AB,HIST1H2BG,HIST1H2BF,HIST1H2BH,HIST1H2BI,HIST1H3A,HIST1H3D,HIST1H3C,HIST1H3E,HIST1H3G,HIST1H3B,HIST1H4A,HIST1H4F,HIST1H4H,HIST1H4B,HIST1H4E,HIST1H4G,HIST1H1C,HIST1H1D,HIST1H1A,TRIM38,HIST1H3
SE_01_003900587 chr6:26155143-26174186 Sample_01_0039 Haematopoietic and lymphoid tissue bone marrow K562 587 3 623 35 7 15 361 HIST1H2BD,HIST1H1E,HIST1H2BG,HIST1H4D,HIST1H2AC,HIST1H2BE,HIST1H3D,HIST1H2BC,HIST1H4E,HIST1H2BF,HIST1H2AE,HIST1H1T,HIST1H2AD,HIST1H2AH,HIST1H2BH,HIST1H2BK,HIST1H3F,HIST1H4C,HIST1H1D
SE_00_003900243 chr6:26194179-26200685 Sample_00_0039 Spleen spleen_3y 243 1 286 39 3 0 328 HIST1H2BF,HIST1H3D,HIST1H2AD,HIST1H2BG,HIST1H4D,HIST1H3F,HIST1H4G,HIST1H3E,HIST1H2BE,HIST1H4E,HIST1H2AE,HIST1H2BD,HIST1H4F,HIST1H1D,HIST1H1E,HIST1H1T,HIST1H2AC,HIST1H2BC
SE_00_003900065 chr6:26222428-26252552 Sample_00_0039 Spleen spleen_3y 65 4 973 120 11 0 852 HIST1H4F,HIST1H3F,HIST1H2BH,HIST1H1D,HIST1H3E,HIST1H4G,HIST1H2BG,HIST1H4D,HIST1H2BI,HIST1H2BE,HIST1H3D,HIST1H4E,HIST1H2BF,HIST1H2AD,HIST1H2AE,HIST1H3G,HIST1H4H,HIST1H1T,HIST1H2BD
SE_00_003100395 chr6:26270688-26331610 Sample_00_0031 Placenta placenta 395 8 1771 283 55 0 1116 HIST1H4H,HIST1H2BI,HIST1H3G,HIST1H1D,HIST1H3F,HIST1H2BH,BTN3A2,HIST1H3E,HIST1H4G,HIST1H4F,HIST1H1T,HIST1H2AD,HIST1H2AE,HIST1H2BF,HIST1H2BG,HIST1H3D
Genomic distribution of SEs associated with HIST1H1T
Genome Browser

The strength of the tissue affected by the gene

Expression of HIST1H1T

Cell line (ENCODE) Primary cell (ENCODE)Tissue (NCBI) Normal tissue (GTEx) Cell line (CCLE)