SEdb 2.0
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Gene overview

Strategies/Algorithm: lasso Ensembl ID: ENSG00000100084
Gene: HIRA Gene type: protein_coding
Strand: - External links:
Genomic region: chr22:19330698-19447450 Genome Browser:

Super-enhancer search result of gene-based

GREAT Download bed
SE ID SE Region Sample ID Tissue type Biosample name SE rank Element Common SNP eQTL Risk SNP TFBS CRISPR Cas9 Gene
SE_04_000200128 chr22:19395038-19434016 Sample_04_0002 Blood cold shocked K562 128 6 987 100 4 173 818 MRPL40,HIRA,CDC45,C22ORF39,UFD1L,CLTCL1,C22orf39,CLDN5
SE_04_000100178 chr22:19395207-19433839 Sample_04_0001 Blood heat shocked K562 178 5 979 100 4 173 818 MRPL40,HIRA,CDC45,C22ORF39,UFD1L,CLTCL1,C22orf39,CLDN5
SE_02_054500374 chr22:19418288-19433797 Sample_02_0545 Bone marrow K562 WT 374 3 385 46 1 64 351 MRPL40,HIRA,CDC45,C22ORF39,UFD1L,CLDN5
SE_02_103300281 chr22:19418361-19433740 Sample_02_1033 Haematopoietic and lymphoid tissue bone marrow K562 281 3 379 45 1 64 351 MRPL40,HIRA,CDC45,C22ORF39,UFD1L,CLDN5
SE_02_111600272 chr22:19418881-19433708 Sample_02_1116 Haematopoietic and lymphoid tissue bone marrow K562_native 272 3 361 36 1 64 351 MRPL40,HIRA,CDC45,C22ORF39,UFD1L,CLDN5
Genomic distribution of SEs associated with HIRA
Genome Browser

The strength of the tissue affected by the gene

Expression of HIRA

Cell line (ENCODE) Primary cell (ENCODE)Tissue (NCBI) Normal tissue (GTEx) Cell line (CCLE)