SEdb 2.0
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Gene overview

Strategies/Algorithm: lasso Ensembl ID: ENSG00000173805
Gene: HAP1 Gene type: protein_coding
Strand: - External links:
Genomic region: chr17:41717742-41734644 Genome Browser:

Super-enhancer search result of gene-based

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SE ID SE Region Sample ID Tissue type Biosample name SE rank Element Common SNP eQTL Risk SNP TFBS CRISPR Cas9 Gene
SE_02_113200109 chr17:41645322-41680488 Sample_02_1132 Pancreas KLM1 wt 109 14 991 118 1 46 0 EIF1,GAST,KRT17,KRT16,KRT42P,KRT14,HAP1,KRT13
SE_02_092901194 chr17:41665536-41692127 Sample_02_0929 Mid-gestation placenta trophoblast__CytT 1194 9 800 100 2 63 400 EIF1,GAST,KRT17,HAP1,KRT42P,LEPREL4,FKBP10,KRT19,KRT15
SE_02_146400106 chr17:41759181-41801655 Sample_02_1464 Ovary CAOV4 106 14 1204 112 2 225 1040 JUP,GAST,HAP1,P3H4,NT5C3B,KLHL10,FKBP10,DNAJC7,NKIRAS2,EIF1,LEPREL4,KLHL11
SE_02_080800227 chr17:41759637-41803987 Sample_02_0808 Ovary RMG1_ARID1A KO 227 19 1257 115 2 238 1439 JUP,P3H4,GAST,HAP1,NT5C3B,KLHL10,FKBP10,DNAJC7,NKIRAS2,EIF1,LEPREL4,KLHL11
SE_02_092900317 chr17:41762691-41801666 Sample_02_0929 Mid-gestation placenta trophoblast__CytT 317 13 1102 104 2 225 1040 JUP,FKBP10,HAP1,P3H4,NT5C3B,KLHL10,LEPREL4
SE_02_093000320 chr17:41763112-41801685 Sample_02_0930 Mid-gestation placenta trophoblast__SynT 320 20 1091 104 2 219 995 JUP,FKBP10,HAP1,P3H4,NT5C3B,KLHL10,LEPREL4
SE_02_146500086 chr17:41769460-41809868 Sample_02_1465 Ovary CAOV4cis 86 11 1157 112 2 208 1182 JUP,P3H4,FKBP10,HAP1,NT5C3B,KLHL10,DNAJC7,NKIRAS2,EIF1,LEPREL4,KLHL11
SE_02_113200234 chr17:41770205-41801676 Sample_02_1132 Pancreas KLM1 wt 234 17 871 87 2 171 421 JUP,FKBP10,HAP1,P3H4,NT5C3B,KLHL10,LEPREL4
SE_02_077001088 chr17:41771314-41801560 Sample_02_0770 Ovary OVCA429_shLuc 1088 27 830 83 2 171 421 JUP,FKBP10,HAP1,P3H4,NT5C3B,KLHL10,DNAJC7,NKIRAS2,EIF1,LEPREL4,KLHL11
SE_02_076700783 chr17:41771558-41801256 Sample_02_0767 Ovary OVCA429 783 15 821 83 2 170 398 JUP,FKBP10,HAP1,P3H4,NT5C3B,KLHL10,DNAJC7,NKIRAS2,EIF1,LEPREL4,KLHL11
SE_02_077100924 chr17:41772028-41801496 Sample_02_0771 Ovary OVCA429_shGRHL2 924 17 814 82 2 169 281 JUP,FKBP10,HAP1,P3H4,NT5C3B,KLHL10,DNAJC7,NKIRAS2,EIF1,LEPREL4,KLHL11
SE_01_011200354 chr17:41777130-41801689 Sample_01_0112 Embryonic kidney HEK293_encode 354 5 672 71 2 144 279 JUP,FKBP10,HAP1,P3H4,NT5C3B,KLHL10,EIF1,LEPREL4
Genomic distribution of SEs associated with HAP1
Genome Browser

The strength of the tissue affected by the gene

Expression of HAP1

Cell line (ENCODE) Primary cell (ENCODE)Tissue (NCBI) Normal tissue (GTEx) Cell line (CCLE)