Gene overview

Strategies/Algorithm: lasso Ensembl ID: ENSG00000111305
Gene: GSG1 Gene type: protein_coding
Strand: - External links:
Genomic region: chr12:13083532-13103683 Genome Browser:

Super-enhancer search result of gene-based

SE ID SE Region Sample ID Tissue type Biosample name SE rank Element Common SNP eQTL Risk SNP TFBS CRISPR Cas9 Gene
SE_00_003100453 chr12:13089667-13149520 Sample_00_0031 Placenta placenta 453 6 1524 94 2 165 307 GSG1,EMP1,KIAA1467,EP1
SE_02_146300020 chr12:13090971-13232771 Sample_02_1463 Ovary A2780_shMBD3.232 20 54 3724 218 20 384 686 GSG1,EMP1,FAM234B,HEBP1,DDX47,KIAA1467
SE_02_093001177 chr12:13091492-13103232 Sample_02_0930 Mid-gestation placenta trophoblast__SynT 1177 5 270 6 1 58 84 GSG1,FAM234B,EMP1,HEBP1,KIAA1467
SE_02_092901097 chr12:13091720-13103183 Sample_02_0929 Mid-gestation placenta trophoblast__CytT 1097 6 264 6 1 58 84 GSG1,FAM234B,EMP1,HEBP1,KIAA1467
SE_02_095001233 chr12:13093427-13102198 Sample_02_0950 Umbilical vein HUVEC_WT 1233 3 202 5 1 54 84 GSG1,FAM234B,EMP1,HEBP1,KIAA1467
SE_02_152000751 chr12:13093584-13101868 Sample_02_1520 Umbilical vein HUVEC_Notch1kd_IL1beta 751 3 194 5 1 54 84 GSG1,FAM234B,EMP1,HEBP1,KIAA1467
SE_01_011500897 chr12:13093624-13102371 Sample_01_0115 Skeletal Muscle myotube originated from skeletal muscle myoblast 897 3 201 4 1 55 84 GSG1,FAM234B,EMP1,HEBP1,KIAA1467
SE_02_058500528 chr12:13093650-13102335 Sample_02_0585 Umbilical vein HUVEC 0hour 528 3 200 4 1 55 84 GSG1,FAM234B,EMP1,HEBP1,KIAA1467
SE_02_083100639 chr12:13096949-13102287 Sample_02_0831 Umblical vein HUVECs_TNF0min 639 2 125 2 0 44 0 GSG1,EMP1,HEBP1,KIAA1467
SE_02_130900143 chr12:13097037-13102673 Sample_02_1309 Artery Pulmonary artery endothelial cells_Control 143 1 134 2 0 44 0 GSG1,EMP1,HEBP1,DDX47,KIAA1467
SE_02_130800181 chr12:13097081-13102606 Sample_02_1308 Artery Pulmonary artery endothelial cells_caMEK5 181 1 131 2 0 44 0 GSG1,EMP1,HEBP1,DDX47,KIAA1467
SE_02_062000220 chr12:13097239-13102317 Sample_02_0620 Aortic Aortic Endothelial Cells_DF 220 3 117 2 0 44 0 GSG1,EMP1,HEBP1,KIAA1467
SE_02_083200735 chr12:13097382-13102306 Sample_02_0832 Umblical vein HUVECs_TNF30min 735 1 111 2 0 44 0 GSG1,EMP1,HEBP1,KIAA1467
SE_02_062100094 chr12:13097814-13101875 Sample_02_0621 Aortic Aortic Endothelial Cells_UF 94 5 90 2 0 43 0 GSG1,EMP1,HEBP1,KIAA1467
SE_02_116500127 chr12:13099032-13115354 Sample_02_1165 Testis round spermatids 127 4 392 31 1 41 88 GSG1,EMP1,HEBP1,KIAA1467
SE_02_077000052 chr12:13115811-13234516 Sample_02_0770 Ovary OVCA429_shLuc 52 48 3187 183 20 319 508 EMP1,GSG1,HEBP1
SE_02_076700044 chr12:13118640-13213677 Sample_02_0767 Ovary OVCA429 44 50 2543 151 7 250 140 EMP1,GSG1,HEBP1
SE_02_146200051 chr12:13152454-13234699 Sample_02_1462 Ovary A2780_shMBD3.26 51 31 2232 129 20 231 508 EMP1,GSG1,HEBP1
SE_02_156600065 chr12:13152465-13231135 Sample_02_1566 Dermal Dermal fibroblast 65 20 2122 126 18 225 508 EMP1,GSG1
SE_02_146100065 chr12:13153286-13234685 Sample_02_1461 Ovary A2780_shRen 65 31 2220 129 20 231 508 EMP1,GSG1,HEBP1
SE_02_076600027 chr12:13154056-13234696 Sample_02_0766 Ovary PEO1 27 30 2206 129 20 231 508 EMP1,HEBP1,GSG1
SE_00_003100931 chr12:13162051-13199963 Sample_00_0031 Placenta placenta 931 4 1026 78 6 128 66 EMP1,EP1,GSG1,HEBP1
SE_02_050000147 chr12:13165040-13256812 Sample_02_0500 Fetal lung IMR90_#2 147 28 2512 135 23 253 508 EMP1,KIAA1467,GSG1
SE_02_076900020 chr12:13165111-13225432 Sample_02_0769 Ovary HEYA8 20 26 1645 112 15 204 508 EMP1,HEBP1,GSG1
SE_02_077100216 chr12:13193738-13234595 Sample_02_0771 Ovary OVCA429_shGRHL2 216 16 1149 57 14 135 508 EMP1,GSG1

Genomic distribution of SEs associated with GSG1

The strength of the tissue affected by the gene


Expression of GSG1