SEdb 2.0
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Gene overview

Strategies/Algorithm: lasso Ensembl ID: ENSG00000141560
Gene: FN3KRP Gene type: protein_coding
Strand: + External links:
Genomic region: chr17:82716706-82730328 Genome Browser:

Super-enhancer search result of gene-based

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SE ID SE Region Sample ID Tissue type Biosample name SE rank Element Common SNP eQTL Risk SNP TFBS CRISPR Cas9 Gene
SE_01_010700086 chr17:82821353-82894272 Sample_01_0107 Esophagus esophagus squamous epithelium 86 18 2668 383 5 0 864 ZNF750,TBCD,METRNL,B3GNTL1,FN3KRP
SE_02_094700466 chr17:82835344-82890341 Sample_02_0947 Tongue Cal27 466 7 2049 294 3 0 271 ZNF750,TBCD,RAB40B,FN3K,FN3KRP
SE_02_092900228 chr17:82835902-82890869 Sample_02_0929 Mid-gestation placenta trophoblast__CytT 228 26 2059 296 3 0 271 ZNF750,TBCD,B3GNTL1,FN3K,FN3KRP
SE_02_093000298 chr17:82836143-82893980 Sample_02_0930 Mid-gestation placenta trophoblast__SynT 298 35 2154 305 3 0 317 ZNF750,TBCD,B3GNTL1,FN3K,FN3KRP
SE_02_073900842 chr17:82849818-82873199 Sample_02_0739 Blood Nalm6 842 6 885 124 1 0 89 TBCD,ZNF750,FN3KRP
SE_02_088500498 chr17:82858268-82885265 Sample_02_0885 Blood NALM6_2 498 6 1019 139 2 0 151 TBCD,ZNF750,FN3KRP
SE_02_153300369 chr17:82874919-82894062 Sample_02_1533 Lung purified primary alveolar epithelial type 2 cells 369 7 683 96 1 0 154 TBCD,ZNF750,C17orf62,RAB40B,WDR45B,FN3KRP
SE_02_151300916 chr17:82874927-82893363 Sample_02_1513 Lung Transitional AT2->1 cells 916 9 667 94 1 0 108 TBCD,ZNF750,C17orf62,RAB40B,WDR45B,FN3KRP
SE_02_151200370 chr17:82874944-82894085 Sample_02_1512 Lung Purified AT2 cells 370 7 683 97 1 0 154 TBCD,ZNF750,C17orf62,RAB40B,WDR45B,FN3KRP
Genomic distribution of SEs associated with FN3KRP
Genome Browser

The strength of the tissue affected by the gene

Expression of FN3KRP

Cell line (ENCODE) Primary cell (ENCODE)Tissue (NCBI) Normal tissue (GTEx) Cell line (CCLE)