SEdb 2.0
  1. Search
  2. Super-enhancer search result of gene-based

Gene overview

Strategies/Algorithm: lasso Ensembl ID: ENSG00000221968
Gene: FADS3 Gene type: protein_coding
Strand: - External links:
Genomic region: chr11:61873519-61892051 Genome Browser:

Super-enhancer search result of gene-based

GREAT Download bed
SE ID SE Region Sample ID Tissue type Biosample name SE rank Element Common SNP eQTL Risk SNP TFBS CRISPR Cas9 Gene
SE_02_088500776 chr11:61826302-61836342 Sample_02_0885 Blood NALM6_2 776 2 226 33 17 14 179 FADS2,FADS1,TMEM258,MIR6746,MIR611,MIR1908,FEN1,RAB3IL1,FADS3
SE_02_121700219 chr11:61826456-61835914 Sample_02_1217 Blood Jurkat ZBTB1 KO_ZBTB1_expressing FLAG-ZBTB1_Asparagine deprivation 219 1 208 29 15 13 179 FADS2,FADS1,TMEM258,MIR6746,MIR611,MIR1908,FEN1,RAB3IL1,FADS3
SE_02_057300530 chr11:61826460-61836468 Sample_02_0573 Blood Nalm6_1 530 3 227 31 16 14 179 FADS2,FADS1,TMEM258,MIR6746,MIR611,MIR1908,FEN1,RAB3IL1,FADS3
SE_02_121600120 chr11:61826510-61836655 Sample_02_1216 Blood Jurkat ZBTB1 KO 120 2 228 31 16 14 179 FADS2,FADS1,TMEM258,MIR6746,MIR611,MIR1908,FEN1,RAB3IL1,FADS3
SE_02_121500231 chr11:61826693-61835945 Sample_02_1215 Blood Jurkat ZBTB1 KO_Asparagine deprivation 231 1 206 28 15 14 179 FADS2,FADS1,TMEM258,MIR6746,MIR611,MIR1908,FEN1,RAB3IL1,FADS3
SE_02_121400163 chr11:61826848-61835652 Sample_02_1214 Blood Jurkat ZBTB1 KO_ZBTB1_expressing FLAG-ZBTB1 163 2 192 26 13 13 179 FADS2,FADS1,TMEM258,MIR6746,MIR611,MIR1908,FEN1,RAB3IL1,FADS3
SE_02_107100090 chr11:61826982-61839017 Sample_02_1071 Blood Jurkat_WT 90 6 273 39 22 19 289 FADS2,FADS1,TMEM258,MIR6746,MIR611,MIR1908,FEN1,RAB3IL1,FADS3
SE_02_151300341 chr11:61963296-61986795 Sample_02_1513 Lung Transitional AT2->1 cells 341 4 589 60 11 88 797 FTH1,BEST1,RAB3IL1,FADS3
SE_02_062000084 chr11:61963351-61979659 Sample_02_0620 Aortic Aortic Endothelial Cells_DF 84 11 398 36 10 88 784 FTH1,BEST1,RAB3IL1,FADS2,TMEM258,FADS3
SE_02_094100669 chr11:62004102-62026200 Sample_02_0941 Brain T98G 669 4 683 58 7 19 0 FTH1,FADS3
SE_02_113200084 chr11:62004364-62055280 Sample_02_1132 Pancreas KLM1 wt 84 22 1476 128 20 19 0 FTH1,BEST1,RAB3IL1,INCENP,FADS3
Genomic distribution of SEs associated with FADS3
Genome Browser

The strength of the tissue affected by the gene

Expression of FADS3

Cell line (ENCODE) Primary cell (ENCODE)Tissue (NCBI) Normal tissue (GTEx) Cell line (CCLE)