SEdb 2.0
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Gene overview

Strategies/Algorithm: lasso Ensembl ID: ENSG00000196411
Gene: EPHB4 Gene type: protein_coding
Strand: - External links:
Genomic region: chr7:100802565-100827523 Genome Browser:

Super-enhancer search result of gene-based

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SE ID SE Region Sample ID Tissue type Biosample name SE rank Element Common SNP eQTL Risk SNP TFBS CRISPR Cas9 Gene
SE_02_093001447 chr7:100800084-100837777 Sample_02_0930 Mid-gestation placenta trophoblast__SynT 1447 21 1189 112 2 0 2528 EPHB4,SLC12A9,SRRT,TRIP6,MIR6875,EPO,UFSP1
SE_02_122900220 chr7:100800443-100850605 Sample_02_1229 Haematopoietic and lymphoid tissue bone marrow K562_Control 220 32 1548 143 2 0 2528 EPHB4,ACHE,MIR6875,SRRT,UFSP1,SLC12A9,TRIP6,TSC22D4
SE_00_005500945 chr7:100800817-100837943 Sample_00_0055 Spleen spleen 34y 945 15 1175 112 2 0 2528 EPHB4,SLC12A9,SRRT,TRIP6,MIR6875
SE_04_000100610 chr7:100818448-100845022 Sample_04_0001 Blood heat shocked K562 610 5 783 77 1 0 1330 EPHB4,MIR6875,UFSP1,SRRT,SLC12A9,TRIP6,ACHE,TSC22D4
SE_02_113000503 chr7:100818765-100844955 Sample_02_1130 Haematopoietic and lymphoid tissue bone marrow K562_??Np63?? expressing 503 5 761 73 1 0 1266 EPHB4,MIR6875,UFSP1,SRRT,SLC12A9,TRIP6,ACHE,TSC22D4
SE_02_109900956 chr7:100819404-100845153 Sample_02_1099 Haematopoietic and lymphoid tissue bone marrow K562_DMSO_noIFNG 956 6 749 67 1 0 1250 EPHB4,MIR6875,UFSP1,SRRT,SLC12A9,TRIP6,ACHE,TSC22D4
SE_02_111600538 chr7:100825552-100844869 Sample_02_1116 Haematopoietic and lymphoid tissue bone marrow K562_native 538 4 512 45 1 0 309 EPHB4,MIR6875,UFSP1,SRRT,SLC12A9,TRIP6,ACHE,TSC22D4
SE_02_151300595 chr7:100915152-100943003 Sample_02_1513 Lung Transitional AT2->1 cells 595 6 835 112 1 0 0 ACHE,MIR6875,SRRT,UFSP1,MUC3A,MUC12,TRIP6,EPHB4,TRIM56
SE_02_151400793 chr7:100915384-100942801 Sample_02_1514 Lung Differentiated AT1-like cells 793 7 819 109 0 0 0 ACHE,MIR6875,SRRT,UFSP1,MUC3A,MUC12,TRIP6,EPHB4,TRIM56
Genomic distribution of SEs associated with EPHB4
Genome Browser

The strength of the tissue affected by the gene

Expression of EPHB4

Cell line (ENCODE) Primary cell (ENCODE)Tissue (NCBI) Normal tissue (GTEx) Cell line (CCLE)