SEdb 2.0
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Gene overview

Strategies/Algorithm: lasso Ensembl ID: ENSG00000173812
Gene: EIF1 Gene type: protein_coding
Strand: + External links:
Genomic region: chr17:41688885-41692668 Genome Browser:

Super-enhancer search result of gene-based

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SE ID SE Region Sample ID Tissue type Biosample name SE rank Element Common SNP eQTL Risk SNP TFBS CRISPR Cas9 Gene
SE_04_000100471 chr17:40815885-40846185 Sample_04_0001 Blood heat shocked K562 471 4 828 98 0 97 716 TMEM99,KRT10,KRT27,KRT28,KRT12,KRT20,KRT26,SMARCE1,EIF1
SE_04_000200594 chr17:40816237-40845021 Sample_04_0002 Blood cold shocked K562 594 3 798 95 0 96 716 TMEM99,KRT10,KRT27,KRT28,KRT12,KRT20,KRT26,SMARCE1,EIF1
SE_02_122900876 chr17:40816891-40845579 Sample_02_1229 Haematopoietic and lymphoid tissue bone marrow K562_Control 876 18 789 94 0 96 716 TMEM99,KRT10,KRT27,KRT28,KRT12,KRT20,KRT26,SMARCE1,EIF1
SE_02_111600353 chr17:40817562-40844981 Sample_02_1116 Haematopoietic and lymphoid tissue bone marrow K562_native 353 4 746 90 0 95 716 TMEM99,KRT10,KRT27,KRT28,KRT12,KRT20,KRT26,SMARCE1,EIF1
SE_02_054500603 chr17:40817577-40831614 Sample_02_0545 Bone marrow K562 WT 603 4 368 43 0 86 471 TMEM99,KRT10,KRT27,KRT28,KRT12,KRT26,SMARCE1,EIF1
SE_02_113000847 chr17:40817952-40831556 Sample_02_1130 Haematopoietic and lymphoid tissue bone marrow K562_??Np63?? expressing 847 5 348 39 0 86 469 TMEM99,KRT10,KRT27,KRT28,KRT12,KRT26,SMARCE1,EIF1
SE_02_070600099 chr17:41520558-41550837 Sample_02_0706 Pancreas SUIT2 WT 99 17 898 70 3 111 931 LINC00974,KRT19,MIR6510,KRT35,KRT36,KRT15,KRT9,KRT13,KRT14,EIF1
SE_02_071600320 chr17:41520670-41550755 Sample_02_0716 Pancreas SUIT2_GFP 320 14 894 70 3 110 922 LINC00974,KRT19,MIR6510,KRT35,KRT36,KRT15,KRT9,KRT13,KRT14,EIF1
SE_01_003600280 chr17:41623175-41657600 Sample_01_0036 Cervix HeLa-S3 280 5 1029 60 0 153 1642 KRT17,KRT42P,EIF1,KRT14,KRT16,GAST,KRT15,KRT19
SE_01_010700051 chr17:41642208-41697478 Sample_01_0107 Esophagus esophagus squamous epithelium 51 9 1573 152 2 117 400 EIF1,HAP1,GAST,KRT17,KRT42P,KRT16,KRT19,KRT15,KRT9,JUP,KRT13
SE_02_094700048 chr17:41645251-41679762 Sample_02_0947 Tongue Cal27 48 9 979 119 1 46 0 EIF1,GAST,KRT17,KRT16,KRT42P,KRT14,KRT15,KRT32,KRT36,NT5C3B
SE_02_048000075 chr17:41645313-41679116 Sample_02_0480 Gingival epithelial HGEP 75 18 969 118 1 46 0 EIF1,GAST,KRT17,KRT16,KRT42P,KRT14,KRT15,FKBP10,JUP
SE_02_113200109 chr17:41645322-41680488 Sample_02_1132 Pancreas KLM1 wt 109 14 991 118 1 46 0 EIF1,GAST,KRT17,KRT16,KRT42P,KRT14,HAP1,KRT13
SE_02_094600260 chr17:41645664-41679760 Sample_02_0946 Tongue HN12 260 5 971 118 1 46 0 EIF1,GAST,KRT17,KRT16,KRT42P,KRT14,KRT15,KRT32,KRT36,NT5C3B
SE_02_066600009 chr17:41645770-41679125 Sample_02_0666 Prostate RWPE1 Lacz rep1 9 9 959 118 1 46 0 EIF1,GAST,KRT17,KRT16,KRT42P,KRT14,LEPREL4
SE_02_047700249 chr17:41648043-41679622 Sample_02_0477 Colon intestinal epithelial organoids_139a 249 8 908 114 1 46 0 EIF1,GAST,KRT17,KRT16,KRT42P,KRT14,LEPREL4,FKBP10
SE_02_098900159 chr17:41648088-41706257 Sample_02_0989 Kidney kidney cortex_WT 159 16 1689 194 2 110 400 EIF1,HAP1,GAST,KRT17,KRT42P,KRT16,KRT14,ACLY,LEPREL4,KLHL11,FKBP10,JUP,TTC25,NT5C3B
SE_02_047800334 chr17:41648092-41679681 Sample_02_0478 Colon normal colon mucosa 334 11 908 114 1 46 0 EIF1,GAST,KRT17,KRT16,KRT42P,KRT14,LEPREL4
SE_01_009900246 chr17:41648099-41679626 Sample_01_0099 Colon transverse colon 246 7 908 114 1 46 0 EIF1,GAST,KRT17,KRT16,KRT42P,KRT14,LEPREL4
SE_01_010900322 chr17:41648116-41697888 Sample_01_0109 Colon transverse colon_54y 322 11 1447 148 2 109 400 EIF1,HAP1,GAST,KRT17,KRT42P,KRT16,KRT14,LEPREL4
SE_02_123800100 chr17:41648119-41667129 Sample_02_1238 Skin MS1_virus_positive 100 11 527 43 0 45 0 EIF1,GAST,KRT17,KRT16,KRT42P,KRT9,KRT14,NT5C3B
SE_00_004900186 chr17:41648138-41679150 Sample_00_0049 Small intestine small intestine 30y 186 9 903 114 1 46 0 EIF1,GAST,KRT17,KRT16,KRT42P,KRT14
SE_01_010400349 chr17:41648363-41697354 Sample_01_0104 Lung upper lobe of left lung 349 11 1434 146 2 109 400 EIF1,HAP1,GAST,KRT17,KRT42P,KRT16,KRT9,JUP
SE_01_010100620 chr17:41648484-41697492 Sample_01_0101 Pancreas pancreas_54y 620 10 1433 146 2 109 400 EIF1,HAP1,GAST,KRT17,KRT42P,KRT16
SE_02_066500013 chr17:41649369-41666138 Sample_02_0665 Prostate RWPE1 Schlap1 rep1 13 6 482 40 0 45 0 EIF1,GAST,KRT17,KRT16,KRT42P,KRT14,LEPREL4
SE_02_153300399 chr17:41651057-41691030 Sample_02_1533 Lung purified primary alveolar epithelial type 2 cells 399 8 1175 129 2 101 301 EIF1,HAP1,GAST,KRT17,KRT42P,KRT16,KRT9,JUP
SE_02_151200409 chr17:41651057-41691069 Sample_02_1512 Lung Purified AT2 cells 409 7 1177 129 2 101 306 EIF1,HAP1,GAST,KRT17,KRT42P,KRT16,KRT9,JUP
SE_00_005000011 chr17:41651087-41666367 Sample_00_0050 Esophagus esophagus_30y 11 7 442 33 0 40 0 EIF1,GAST,KRT17,KRT16,KRT42P,KRT13,KRT15
SE_02_122900544 chr17:41664166-41696034 Sample_02_1229 Haematopoietic and lymphoid tissue bone marrow K562_Control 544 20 952 105 2 67 400 EIF1,GAST,KRT17,HAP1,KRT42P,KRT13
SE_04_000200635 chr17:41665068-41696017 Sample_04_0002 Blood cold shocked K562 635 5 927 104 2 64 400 EIF1,GAST,KRT17,HAP1,KRT42P,KRT13
SE_04_000101168 chr17:41665359-41691451 Sample_04_0001 Blood heat shocked K562 1168 4 782 99 2 61 365 EIF1,GAST,KRT17,HAP1,KRT42P,KRT13
SE_01_003900315 chr17:41665463-41691623 Sample_01_0039 Haematopoietic and lymphoid tissue bone marrow K562 315 4 785 99 2 61 377 EIF1,GAST,HAP1,KRT17,KRT42P,KRT13
SE_02_092901194 chr17:41665536-41692127 Sample_02_0929 Mid-gestation placenta trophoblast__CytT 1194 9 800 100 2 63 400 EIF1,GAST,KRT17,HAP1,KRT42P,LEPREL4,FKBP10,KRT19,KRT15
SE_02_054501117 chr17:41665567-41681056 Sample_02_0545 Bone marrow K562 WT 1117 9 457 77 1 1 0 EIF1,GAST,KRT17,KRT42P,KRT13
SE_02_098700415 chr17:41665569-41690938 Sample_02_0987 Blood K562_Control_1 415 12 756 99 2 60 293 EIF1,GAST,KRT17,HAP1,KRT42P,KRT13
SE_02_103300539 chr17:41665577-41695615 Sample_02_1033 Haematopoietic and lymphoid tissue bone marrow K562 539 7 918 104 2 63 400 EIF1,GAST,KRT17,HAP1,KRT42P,KRT13
SE_02_109900446 chr17:41665611-41697267 Sample_02_1099 Haematopoietic and lymphoid tissue bone marrow K562_DMSO_noIFNG 446 13 953 107 2 64 400 EIF1,GAST,KRT17,HAP1,KRT42P,KRT13
SE_02_146400106 chr17:41759181-41801655 Sample_02_1464 Ovary CAOV4 106 14 1204 112 2 225 1040 JUP,GAST,HAP1,P3H4,NT5C3B,KLHL10,FKBP10,DNAJC7,NKIRAS2,EIF1,LEPREL4,KLHL11
SE_02_080800227 chr17:41759637-41803987 Sample_02_0808 Ovary RMG1_ARID1A KO 227 19 1257 115 2 238 1439 JUP,P3H4,GAST,HAP1,NT5C3B,KLHL10,FKBP10,DNAJC7,NKIRAS2,EIF1,LEPREL4,KLHL11
SE_01_010700083 chr17:41768744-41801817 Sample_01_0107 Esophagus esophagus squamous epithelium 83 5 934 90 2 197 681 JUP,FKBP10,HAP1,P3H4,NT5C3B,KLHL10,KRT16,EIF1,LEPREL4
SE_02_146500086 chr17:41769460-41809868 Sample_02_1465 Ovary CAOV4cis 86 11 1157 112 2 208 1182 JUP,P3H4,FKBP10,HAP1,NT5C3B,KLHL10,DNAJC7,NKIRAS2,EIF1,LEPREL4,KLHL11
SE_02_047700216 chr17:41770303-41807502 Sample_02_0477 Colon intestinal epithelial organoids_139a 216 14 1050 104 2 189 908 JUP,P3H4,FKBP10,HAP1,NT5C3B,KLHL10,EIF1,LEPREL4,KLHL11
SE_02_077001088 chr17:41771314-41801560 Sample_02_0770 Ovary OVCA429_shLuc 1088 27 830 83 2 171 421 JUP,FKBP10,HAP1,P3H4,NT5C3B,KLHL10,DNAJC7,NKIRAS2,EIF1,LEPREL4,KLHL11
SE_02_076700783 chr17:41771558-41801256 Sample_02_0767 Ovary OVCA429 783 15 821 83 2 170 398 JUP,FKBP10,HAP1,P3H4,NT5C3B,KLHL10,DNAJC7,NKIRAS2,EIF1,LEPREL4,KLHL11
SE_02_048000359 chr17:41771951-41801689 Sample_02_0480 Gingival epithelial HGEP 359 14 820 82 2 169 306 JUP,FKBP10,HAP1,P3H4,NT5C3B,KLHL10,KRT17,KRT16,EIF1,LEPREL4,KLHL11
SE_02_077100924 chr17:41772028-41801496 Sample_02_0771 Ovary OVCA429_shGRHL2 924 17 814 82 2 169 281 JUP,FKBP10,HAP1,P3H4,NT5C3B,KLHL10,DNAJC7,NKIRAS2,EIF1,LEPREL4,KLHL11
SE_01_011200354 chr17:41777130-41801689 Sample_01_0112 Embryonic kidney HEK293_encode 354 5 672 71 2 144 279 JUP,FKBP10,HAP1,P3H4,NT5C3B,KLHL10,EIF1,LEPREL4
Genomic distribution of SEs associated with EIF1
Genome Browser

The strength of the tissue affected by the gene

Expression of EIF1

Cell line (ENCODE) Primary cell (ENCODE)Tissue (NCBI) Normal tissue (GTEx) Cell line (CCLE)