SEdb 2.0
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Gene overview

Strategies/Algorithm: lasso Ensembl ID: ENSG00000184014
Gene: DENND5A Gene type: protein_coding
Strand: - External links:
Genomic region: chr11:9138825-9265350 Genome Browser:

Super-enhancer search result of gene-based

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SE ID SE Region Sample ID Tissue type Biosample name SE rank Element Common SNP eQTL Risk SNP TFBS CRISPR Cas9 Gene
SE_02_092400629 chr11:9231742-9287357 Sample_02_0924 Heart fetal heart_PCW10_12569 629 17 1680 153 0 81 573 TMEM41B,DENND5A
SE_02_092301001 chr11:9250182-9287000 Sample_02_0923 Heart fetal heart_PCW10_12522 1001 8 1093 96 0 74 573 TMEM41B,DENND5A
SE_02_092100869 chr11:9252815-9289822 Sample_02_0921 Heart embryonic heart_CS22 869 13 1104 104 0 79 640 TMEM41B,DENND5A
SE_02_092200959 chr11:9260026-9287642 Sample_02_0922 Heart fetal heart_PCW10_12434 959 8 818 70 0 68 583 TMEM41B,DENND5A
SE_02_092500807 chr11:9260228-9288041 Sample_02_0925 Heart fetal heart_PCW17_12570 807 11 828 74 0 70 607 TMEM41B,DENND5A
SE_02_092901298 chr11:9262927-9279973 Sample_02_0929 Mid-gestation placenta trophoblast__CytT 1298 10 510 41 0 44 264 DENND5A,TMEM41B
SE_02_122901241 chr11:9289495-9322406 Sample_02_1229 Haematopoietic and lymphoid tissue bone marrow K562_Control 1241 11 926 103 3 30 266 TMEM41B,DENND5A,ZNF143,WEE1,IPO7
SE_02_093000389 chr11:9350749-9382547 Sample_02_0930 Mid-gestation placenta trophoblast__SynT 389 21 1030 68 1 0 0 TMEM41B,IPO7,SNORA23,ZNF143,DENND5A
SE_02_071900988 chr11:9350929-9365404 Sample_02_0719 Pancreas SUIT2_TP63dN_DOX 988 4 474 34 0 0 0 TMEM41B,IPO7,DENND5A,ZNF143
SE_02_092900191 chr11:9351154-9397315 Sample_02_0929 Mid-gestation placenta trophoblast__CytT 191 18 1456 98 2 43 128 IPO7,TMEM41B,SNORA23,ZNF143,DENND5A
Genomic distribution of SEs associated with DENND5A
Genome Browser

The strength of the tissue affected by the gene

Expression of DENND5A

Cell line (ENCODE) Primary cell (ENCODE)Tissue (NCBI) Normal tissue (GTEx) Cell line (CCLE)