SEdb 2.0
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Gene overview

Strategies/Algorithm: lasso Ensembl ID: ENSG00000169738
Gene: DCXR Gene type: protein_coding
Strand: - External links:
Genomic region: chr17:82035136-82037709 Genome Browser:

Super-enhancer search result of gene-based

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SE ID SE Region Sample ID Tissue type Biosample name SE rank Element Common SNP eQTL Risk SNP TFBS CRISPR Cas9 Gene
SE_02_093000038 chr17:81948108-82021155 Sample_02_0930 Mid-gestation placenta trophoblast__SynT 38 44 2571 168 0 291 4034 ASPSCR1,STRA13,NOTUM,MAFG,PYCR1,MYADML2,MAFG-AS1,GPS1,LRRC45,SIRT7,DCXR,RAC3,PCYT2,NPB,RFNG,DUS1L,ANAPC11,FASN,ALYREF,P4HB,AC174470.1,FAM195B
SE_02_092900129 chr17:81949672-82013973 Sample_02_0929 Mid-gestation placenta trophoblast__CytT 129 32 2215 146 0 291 3138 ASPSCR1,NOTUM,MAFG,PYCR1,MYADML2,MAFG-AS1,GPS1,LRRC45,SIRT7,DCXR,RAC3,PCYT2,NPB,RFNG,STRA13,ANAPC11,FASN,DUS1L,ALYREF,P4HB,AC174470.1,FAM195B
SE_02_122901272 chr17:81956154-81981553 Sample_02_1229 Haematopoietic and lymphoid tissue bone marrow K562_Control 1272 8 803 58 0 155 1370 ASPSCR1,NOTUM,MAFG,PYCR1,MYADML2,MAFG-AS1,PCYT2,SIRT7,STRA13,LRRC45,ARHGDIA,DCXR,RAC3
SE_02_046500018 chr17:82076327-82137288 Sample_02_0465 Adipose subcutaneous adipocytes 18 25 2270 284 9 0 5014 CCDC57,FASN,DCXR,RFNG,RAC3,DUS1L,GPS1,PCYT2,ANAPC11,CSNK1D,LRRC45
SE_02_046600285 chr17:82076447-82135835 Sample_02_0466 Adipose visceral adipocytes 285 28 2229 277 9 0 5014 CCDC57,FASN,DCXR,RFNG,RAC3,DUS1L,GPS1,PCYT2,ANAPC11,CSNK1D,LRRC45
SE_02_122900504 chr17:82092738-82122962 Sample_02_1229 Haematopoietic and lymphoid tissue bone marrow K562_Control 504 20 1050 134 1 0 1212 CCDC57,FASN,GPS1,DUS1L,RFNG,DCXR,RAC3,P4HB,SLC16A3,PCYT2,MAFG,STRA13,NPB
SE_02_066000646 chr17:82093932-82110915 Sample_02_0660 Mammary gland MCF10DCIS 646 4 640 78 1 0 584 CCDC57,FASN,GPS1,DUS1L,RFNG,DCXR
SE_02_084100345 chr17:82093967-82134883 Sample_02_0841 Blood THP-1_untr 345 13 1381 224 8 0 1191 CCDC57,FASN,GPS1,DUS1L,RFNG,PPP1R27,SLC16A3,PYCR1,CSNK1D,RAC3,DCXR,STRA13,LRRC45
SE_02_087500764 chr17:82094276-82124870 Sample_02_0875 Peripheral blood Peripheral blood-derived mast cells 764 11 1020 133 2 0 897 CCDC57,FASN,GPS1,DUS1L,RFNG,SLC16A3,CSNK1D,RAC3,DCXR,UTS2R,LRRC45
SE_04_000100399 chr17:82094928-82122712 Sample_04_0001 Blood heat shocked K562 399 4 948 125 1 0 897 CCDC57,FASN,GPS1,DUS1L,RFNG,DCXR,RAC3
SE_04_000200653 chr17:82095092-82122774 Sample_04_0002 Blood cold shocked K562 653 5 947 126 1 0 897 CCDC57,FASN,GPS1,DUS1L,RFNG,DCXR,RAC3
SE_02_066100380 chr17:82095178-82107232 Sample_02_0661 Mammary gland MCF10DCIS-TetTCF7 380 3 468 64 1 0 563 CCDC57,FASN,GPS1,DUS1L,RFNG,DCXR
SE_01_010400443 chr17:82095267-82120189 Sample_01_0104 Lung upper lobe of left lung 443 9 863 110 1 0 861 CCDC57,FASN,GPS1,DUS1L,RFNG,P4HB,SLC16A3,ANAPC11,SECTM1,RAC3,CD7,SLC25A10,DCXR,ASPSCR1,STRA13,LRRC45
SE_02_111600336 chr17:82095411-82122408 Sample_02_1116 Haematopoietic and lymphoid tissue bone marrow K562_native 336 9 928 125 1 0 834 CCDC57,FASN,GPS1,DUS1L,RFNG,DCXR,RAC3
SE_02_047800845 chr17:82095484-82107395 Sample_02_0478 Colon normal colon mucosa 845 2 458 64 1 0 500 CCDC57,FASN,GPS1,DUS1L,RFNG,SLC16A3,C17orf62,PCYT2,ANAPC11,CSNK1D,MAFG,MRPL12,SECTM1,RAC3,CD7,SLC25A10,DCXR,STRA13,LRRC45
SE_02_113000640 chr17:82095490-82119758 Sample_02_1130 Haematopoietic and lymphoid tissue bone marrow K562_??Np63?? expressing 640 9 839 107 1 0 815 CCDC57,FASN,GPS1,DUS1L,RFNG,DCXR,RAC3
SE_02_068200316 chr17:82095606-82107504 Sample_02_0682 Blood Kasumi-1 316 3 456 63 1 0 464 CCDC57,FASN,GPS1,DUS1L,RFNG,MAFG,SLC16A3,RAC3,DCXR,STRA13,LRRC45
SE_02_098700349 chr17:82095700-82124330 Sample_02_0987 Blood K562_Control_1 349 9 942 127 2 0 767 CCDC57,FASN,GPS1,DUS1L,RFNG,SLC16A3,LRRC45,DCXR,RAC3
SE_02_049100977 chr17:82095756-82110945 Sample_02_0491 Pharyng Detroit 562-Control 977 5 564 71 1 0 452 CCDC57,FASN,GPS1,DUS1L,RFNG,P4HB,NARF,ARL16,SLC16A3,PCYT2,PYCR1,ANAPC11,TSPAN10,MAFG,RAC3,ALYREF,DCXR,SIRT7,ASPSCR1,STRA13,LRRC45,NPB
SE_02_072500163 chr17:82096013-82107333 Sample_02_0725 Mammary gland MCF10A-YAP5SA_ctrl 163 4 426 61 1 0 452 CCDC57,FASN,GPS1,DUS1L,RFNG,DCXR
SE_02_113200346 chr17:82096052-82111109 Sample_02_1132 Pancreas KLM1 wt 346 6 552 70 1 0 452 CCDC57,FASN,GPS1,DUS1L,RFNG,SLC16A3,RAC3,DCXR,ASPSCR1,STRA13,LRRC45
SE_02_109900412 chr17:82096071-82124773 Sample_02_1099 Haematopoietic and lymphoid tissue bone marrow K562_DMSO_noIFNG 412 12 937 127 2 0 767 CCDC57,FASN,GPS1,DUS1L,RFNG,SLC16A3,LRRC45,DCXR,RAC3
SE_02_047701146 chr17:82096115-82107870 Sample_02_0477 Colon intestinal epithelial organoids_139a 1146 5 444 62 1 0 452 CCDC57,FASN,GPS1,DUS1L,RFNG,SLC16A3,PCYT2,PYCR1,HGS,DCXR,STRA13
SE_02_046100328 chr17:82096163-82107562 Sample_02_0461 Blood MV-4-11-B cells 328 4 429 61 1 0 444 CCDC57,FASN,GPS1,DUS1L,RFNG,PCYT2,PYCR1,SLC16A3,RAC3,DCXR,STRA13,LRRC45
SE_02_108200477 chr17:82096362-82107564 Sample_02_1082 Retina retina 477 3 423 61 1 0 399 CCDC57,FASN,GPS1,DUS1L,RFNG,SLC16A3,CSNK1D,MAFG,RAC3,DCXR,FN3K,LRRC45
SE_02_094800400 chr17:82096585-82107622 Sample_02_0948 Pharyng Detroit562 400 2 415 60 1 0 341 CCDC57,FASN,GPS1,DUS1L,RFNG,P4HB,NARF,ARL16,SLC16A3,PCYT2,PYCR1,ANAPC11,TSPAN10,MAFG,RAC3,ALYREF,DCXR,SIRT7,ASPSCR1,STRA13,LRRC45,NPB
SE_01_010701036 chr17:82096695-82111176 Sample_01_0107 Esophagus esophagus squamous epithelium 1036 5 525 69 1 0 324 CCDC57,FASN,GPS1,DUS1L,RFNG,SLC16A3,ANAPC11,CSNK1D,MRPL12,RAC3,DCXR,ASPSCR1,LRRC45,CCDC137
SE_02_098800557 chr17:82098469-82122721 Sample_02_0988 Blood K562_EPZ 557 11 826 114 1 0 488 CCDC57,GPS1,DUS1L,RFNG,FASN,DCXR,RAC3
SE_02_111600175 chr17:82266455-82315668 Sample_02_1116 Haematopoietic and lymphoid tissue bone marrow K562_native 175 9 1640 114 2 71 931 CD7,CSNK1D,SLC16A3,TEX19,MIR6787,SECTM1,FASN,DCXR
Genomic distribution of SEs associated with DCXR
Genome Browser

The strength of the tissue affected by the gene

Expression of DCXR

Cell line (ENCODE) Primary cell (ENCODE)Tissue (NCBI) Normal tissue (GTEx) Cell line (CCLE)