SEdb 2.0
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Gene overview

Strategies/Algorithm: lasso Ensembl ID: ENSG00000160213
Gene: CSTB Gene type: protein_coding
Strand: - External links:
Genomic region: chr21:43772511-43776330 Genome Browser:

Super-enhancer search result of gene-based

GREAT Download bed
SE ID SE Region Sample ID Tissue type Biosample name SE rank Element Common SNP eQTL Risk SNP TFBS CRISPR Cas9 Gene
SE_02_048000225 chr21:43477437-43523670 Sample_02_0480 Gingival epithelial HGEP 225 17 1401 48 9 31 130 LINC00313,MIR6070,CSTB,PDXK,RRP1B,SIK1
SE_02_113900945 chr21:43492785-43522637 Sample_02_1139 Retinal Pigmented Epithelial RPE1-anaphase/telophase 945 17 878 47 9 21 0 MIR6070,CSTB,SIK1
SE_02_113700407 chr21:43492813-43522837 Sample_02_1137 Retinal Pigmented Epithelial RPE1-interphase 407 11 883 48 9 21 0 MIR6070,CSTB,SIK1
SE_02_108500205 chr21:43492870-43523639 Sample_02_1085 Retinal Pigmented Epithelial hTERT-RPE1 205 14 891 48 9 21 0 MIR6070,CSTB,SIK1
SE_02_093600208 chr21:43493152-43523322 Sample_02_0936 Retinal Pigmented Epithelial RPE188_TnT 208 12 881 48 9 21 0 MIR6070,CSTB,SIK1
SE_02_093800395 chr21:43493321-43523203 Sample_02_0938 Retinal Pigmented Epithelial RPE190_TnT 395 11 872 48 9 21 0 MIR6070,CSTB,SIK1
SE_02_093500039 chr21:43711792-43779187 Sample_02_0935 Retinal Pigmented Epithelial RPE188_Con 39 25 2384 229 4 68 3408 PDXK,CSTB,RRP1,AATBC,AGPAT3
SE_02_122901363 chr21:43720910-43749735 Sample_02_1229 Haematopoietic and lymphoid tissue bone marrow K562_Control 1363 16 996 78 3 26 1153 PDXK,RRP1,CSTB,RRP1B,AGPAT3
SE_04_000101051 chr21:43726535-43747313 Sample_04_0001 Blood heat shocked K562 1051 3 747 50 3 22 1062 PDXK,RRP1,CSTB,RRP1B,AGPAT3
SE_02_098800746 chr21:43727596-43747068 Sample_02_0988 Blood K562_EPZ 746 6 690 45 3 22 1062 PDXK,RRP1,CSTB,RRP1B,AGPAT3
SE_00_002200928 chr21:43756268-43790156 Sample_00_0022 Lung lung_30y 928 9 1179 146 2 32 1758 RRP1,CSTB,PDXK,LOC284837
SE_02_093700726 chr21:43757719-43779275 Sample_02_0937 Retinal Pigmented Epithelial RPE190_Con 726 5 801 89 1 14 1269 PDXK,CSTB,RRP1,AATBC,AGPAT3
SE_02_093801257 chr21:43757723-43779188 Sample_02_0938 Retinal Pigmented Epithelial RPE190_TnT 1257 4 794 87 1 14 1268 PDXK,CSTB,RRP1,AATBC,AGPAT3
Genomic distribution of SEs associated with CSTB
Genome Browser

The strength of the tissue affected by the gene

Expression of CSTB

Cell line (ENCODE) Primary cell (ENCODE)Tissue (NCBI) Normal tissue (GTEx) Cell line (CCLE)