SEdb 2.0
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Gene overview

Strategies/Algorithm: lasso Ensembl ID: ENSG00000105662
Gene: CRTC1 Gene type: protein_coding
Strand: + External links:
Genomic region: chr19:18683678-18782333 Genome Browser:

Super-enhancer search result of gene-based

GREAT Download bed
SE ID SE Region Sample ID Tissue type Biosample name SE rank Element Common SNP eQTL Risk SNP TFBS CRISPR Cas9 Gene
SE_02_046600274 chr19:18450775-18522127 Sample_02_0466 Adipose visceral adipocytes 274 47 2089 214 24 68 981 ELL,KXD1,ISYNA1,SSBP4,UBA52,FKBP8,PDE4C,C19orf60,PGPEP1,LSM4,CRTC1,KLHL26,MPV17L2,LRRC25
SE_02_112800552 chr19:18457275-18480703 Sample_02_1128 Adipose visceral adipose_CTL_HCTR10 552 9 696 64 9 35 679 ELL,ISYNA1,SSBP4,PDE4C,KXD1,PGPEP1,FKBP8,LSM4,CRTC1,KLHL26,MPV17L2,LRRC25
SE_02_112900087 chr19:18457779-18522079 Sample_02_1129 Adipose visceral adipose_CTL_HCTR13 87 24 1872 192 22 62 751 ELL,KXD1,ISYNA1,SSBP4,UBA52,FKBP8,PDE4C,C19orf60,PGPEP1,LSM4,CRTC1,KLHL26,MPV17L2,LRRC25
SE_02_092900064 chr19:18475362-18530764 Sample_02_0929 Mid-gestation placenta trophoblast__CytT 64 28 1595 164 15 39 226 ELL,KXD1,ISYNA1,UBA52,FKBP8,C19orf60,PGPEP1,GDF15,JUND,COPE,TMEM59L,LSM4,KLHL26,SSBP4,CRLF1,CRTC1
SE_00_003100252 chr19:18476809-18523069 Sample_00_0031 Placenta placenta 252 6 1347 138 13 38 135 ELL,UBA52,ISYNA1,C19ORF50,FKBP8,C19orf60,CRLF1,CRTC1,GDF15,KXD1,SSBP4,TE59L
SE_02_093000207 chr19:18476877-18551780 Sample_02_0930 Mid-gestation placenta trophoblast__SynT 207 34 2187 203 13 113 1466 FKBP8,ELL,KXD1,ISYNA1,C19ORF60,UBA52,C19orf60,PGPEP1,GDF15,JUND,COPE,TMEM59L,LSM4,KLHL26,SSBP4,CRLF1,CRTC1
SE_02_048001266 chr19:18518828-18527790 Sample_02_0480 Gingival epithelial HGEP 1266 4 261 23 2 28 135 ELL,FKBP8,KXD1,UBA52,C19orf60,ISYNA1,CRTC1,KLHL26
SE_04_000200727 chr19:18570492-18597395 Sample_04_0002 Blood cold shocked K562 727 5 796 99 1 108 1931 CRLF1,C19ORF60,UBA52,KXD1,KLHL26,TMEM59L,FKBP8,ELL,C19orf60,CRTC1,JUND
SE_01_011500518 chr19:18648427-18678676 Sample_01_0115 Skeletal Muscle myotube originated from skeletal muscle myoblast 518 8 912 87 1 132 762 KLHL26,CRTC1,CRLF1,TMEM59L,C19orf60
Genomic distribution of SEs associated with CRTC1
Genome Browser

The strength of the tissue affected by the gene

Expression of CRTC1

Cell line (ENCODE) Primary cell (ENCODE)Tissue (NCBI) Normal tissue (GTEx) Cell line (CCLE)