Gene overview

Strategies/Algorithm: lasso Ensembl ID: ENSG00000226976
Gene: COX6A1P2 Gene type: processed_pseudogene
Strand: + External links:
Genomic region: chr6:37044860-37045189 Genome Browser:

Super-enhancer search result of gene-based

SE ID SE Region Sample ID Tissue type Biosample name SE rank Element Common SNP eQTL Risk SNP TFBS CRISPR Cas9 Gene
SE_02_077501223 chr6:36932645-37003847 Sample_02_0775 Pancreas EndoC-BH1_SE 1223 14 2329 306 8 166 2528 PI16,MTCH1,FGD2,C6ORF89,COX6A1P2
SE_04_000200286 chr6:37018843-37063790 Sample_04_0002 Blood cold shocked K562 286 6 1409 119 1 78 873 FGD2,MTCH1,COX6A1P2
SE_02_113000014 chr6:37018889-37085241 Sample_02_1130 Haematopoietic and lymphoid tissue bone marrow K562_??Np63?? expressing 14 15 2017 135 1 114 873 FGD2,MTCH1,PIM1,COX6A1P2
SE_02_109900005 chr6:37018918-37138106 Sample_02_1099 Haematopoietic and lymphoid tissue bone marrow K562_DMSO_noIFNG 5 53 3519 199 3 266 873 FGD2,PIM1,MTCH1,COX6A1P2
SE_04_000100779 chr6:37018939-37063175 Sample_04_0001 Blood heat shocked K562 779 10 1385 119 1 78 873 FGD2,MTCH1,COX6A1P2
SE_02_054500181 chr6:37018950-37064801 Sample_02_0545 Bone marrow K562 WT 181 18 1429 119 1 78 873 FGD2,MTCH1,COX6A1P2
SE_02_098800029 chr6:37023275-37063163 Sample_02_0988 Blood K562_EPZ 29 20 1246 111 1 61 511 FGD2,MTCH1,COX6A1P2
SE_02_098700028 chr6:37024864-37064999 Sample_02_0987 Blood K562_Control_1 28 24 1247 109 1 61 511 FGD2,MTCH1,COX6A1P2
SE_02_103300192 chr6:37025699-37063098 Sample_02_1033 Haematopoietic and lymphoid tissue bone marrow K562 192 10 1161 108 1 61 484 FGD2,MTCH1,COX6A1P2
SE_01_003900194 chr6:37029269-37062197 Sample_01_0039 Haematopoietic and lymphoid tissue bone marrow K562 194 8 1020 102 1 44 0 MTCH1,FGD2,COX6A1P2,TCH1
SE_02_111600391 chr6:37029609-37062983 Sample_02_1116 Haematopoietic and lymphoid tissue bone marrow K562_native 391 11 1034 104 1 44 0 FGD2,MTCH1,COX6A1P2
SE_02_101600501 chr6:37038636-37078210 Sample_02_1016 Embryo H9_Mesendoderm_24h 501 7 1149 56 1 65 0 FGD2,COX6A1P2,MTCH1
SE_02_101700035 chr6:37048712-37172154 Sample_02_1017 Embryo H9_Mesendoderm 24h_Hydroxyurea 35 25 3480 159 5 400 444 PIM1,FGD2,COX6A1P2
SE_04_000200226 chr6:37082301-37132287 Sample_04_0002 Blood cold shocked K562 226 9 1436 58 1 131 0 PIM1,COX6A1P2
SE_02_101600038 chr6:37092789-37146199 Sample_02_1016 Embryo H9_Mesendoderm_24h 38 11 1463 70 2 190 0 PIM1,COX6A1P2
SE_02_098800138 chr6:37101281-37138198 Sample_02_0988 Blood K562_EPZ 138 9 1045 40 2 129 0 PIM1,COX6A1P2
SE_02_098700240 chr6:37101826-37131941 Sample_02_0987 Blood K562_Control_1 240 12 851 32 1 97 0 PIM1,COX6A1P2
SE_02_101500182 chr6:37119644-37146570 Sample_02_1015 Embryo H9_ Undifferentiated 182 6 696 38 1 101 0 PIM1,COX6A1P2
SE_00_005600577 chr6:37131626-37187088 Sample_00_0056 Sigmoid colon sigmoid colon 3y 577 23 1512 73 4 264 911 PIM1,COX6A1P2
SE_02_109900002 chr6:37154911-37247021 Sample_02_1099 Haematopoietic and lymphoid tissue bone marrow K562_DMSO_noIFNG 2 31 2454 133 6 182 1317 TMEM217,PIM1,TBC1D22B,COX6A1P2
SE_02_098700006 chr6:37154994-37212196 Sample_02_0987 Blood K562_Control_1 6 13 1599 83 5 182 938 TMEM217,PIM1,TBC1D22B,COX6A1P2
SE_00_005500836 chr6:37161050-37189881 Sample_00_0055 Spleen spleen 34y 836 8 792 26 2 174 911 PIM1,COX6A1P2
SE_02_109400221 chr6:37161666-37192608 Sample_02_1094 Embryo H9_0Dox 221 10 870 28 2 174 911 PIM1,COX6A1P2

Genomic distribution of SEs associated with COX6A1P2

The strength of the tissue affected by the gene


Expression of COX6A1P2