SEdb 2.0
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Gene overview

Strategies/Algorithm: lasso Ensembl ID: ENSG00000019582
Gene: CD74 Gene type: protein_coding
Strand: - External links:
Genomic region: chr5:150400041-150412929 Genome Browser:

Super-enhancer search result of gene-based

GREAT Download bed
SE ID SE Region Sample ID Tissue type Biosample name SE rank Element Common SNP eQTL Risk SNP TFBS CRISPR Cas9 Gene
SE_02_142900226 chr5:150393422-150429961 Sample_02_1429 Blood GM12878_WT 226 5 1047 93 2 75 1581 TCOF1,CD74,RPS14,NDST1
SE_00_005500434 chr5:150404020-150431866 Sample_00_0055 Spleen spleen 34y 434 10 741 78 3 48 603 CD74,RPS14,TCOF1,NDST1
SE_00_003900310 chr5:150409381-150436503 Sample_00_0039 Spleen spleen_3y 310 4 717 78 1 33 136 CD74,RPS14,NDST1
SE_00_005500018 chr5:150453583-150543693 Sample_00_0055 Spleen spleen 34y 18 48 2611 188 4 330 1359 NDST1,LOC102546298,CD74,RPS14
SE_02_092900791 chr5:150458747-150501999 Sample_02_0929 Mid-gestation placenta trophoblast__CytT 791 16 1210 101 1 147 108 LOC102546298,NDST1,CD74,RPS14,SYNPO,ARSI
SE_02_093000410 chr5:150470184-150502078 Sample_02_0930 Mid-gestation placenta trophoblast__SynT 410 27 886 67 0 122 108 LOC102546298,NDST1,RPS14,CD74,SYNPO,ARSI
SE_00_003900259 chr5:150484708-150524232 Sample_00_0039 Spleen spleen_3y 259 8 1122 66 1 189 489 NDST1,RPS14,CD74
SE_00_004000510 chr5:150484749-150491426 Sample_00_0040 Spleen spleen_30y 510 1 152 11 0 61 0 NDST1,RPS14,CD74
SE_02_112900105 chr5:150591309-150657637 Sample_02_1129 Adipose visceral adipose_CTL_HCTR13 105 29 1908 122 3 427 1892 SYNPO,MYOZ3,RBM22,CD74,CCDC69
Genomic distribution of SEs associated with CD74
Genome Browser

The strength of the tissue affected by the gene

Expression of CD74

Cell line (ENCODE) Primary cell (ENCODE)Tissue (NCBI) Normal tissue (GTEx) Cell line (CCLE)