Gene overview
| Strategies/Algorithm: | lasso | Ensembl ID: | ENSG00000117091 |
| Gene: | CD48 | Gene type: | protein_coding |
| Strand: | - | External links: |
|
| Genomic region: | chr1:160678746-160711831 | Genome Browser: |   |
Super-enhancer search result of gene-based
| SE ID | SE Region | Sample ID | Tissue type | Biosample name | SE rank | Element | Common SNP | eQTL | Risk SNP | TFBS | CRISPR Cas9 | Gene |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| SE_02_142900549 | chr1:160517114-160554197 |
Sample_02_1429 | Blood | GM12878_WT | 549 | 7 | 1180 | 114 | 10 | 38 | 1276 | CD84,SLAMF6,SLAMF1,CD48,SLAMF7,COPA,NCSTN |
| SE_02_142900654 | chr1:160699454-160713638 |
Sample_02_1429 | Blood | GM12878_WT | 654 | 1 | 477 | 34 | 4 | 6 | 75 | CD48,SLAMF7,SLAMF6 |
| SE_01_003000031 | chr1:160703574-160791195 |
Sample_01_0030 | Haematopoietic and lymphoid tissue blood | GM12878 | 31 | 10 | 2589 | 176 | 16 | 68 | 760 | CD48,SLAMF7,LY9,CD244,SLAF1,SLAF7 |
| SE_02_142901179 | chr1:160739271-160748417 |
Sample_02_1429 | Blood | GM12878_WT | 1179 | 1 | 284 | 19 | 1 | 9 | 108 | SLAMF7,LY9,CD48,SLAMF1 |
Genomic distribution of SEs associated with CD48