SEdb 2.0
  1. Search
  2. Super-enhancer search result of gene-based

Gene overview

Strategies/Algorithm: lasso Ensembl ID: ENSG00000150753
Gene: CCT5 Gene type: protein_coding
Strand: + External links:
Genomic region: chr5:10249929-10266389 Genome Browser:

Super-enhancer search result of gene-based

GREAT Download bed
SE ID SE Region Sample ID Tissue type Biosample name SE rank Element Common SNP eQTL Risk SNP TFBS CRISPR Cas9 Gene
SE_02_122900079 chr5:10276220-10324737 Sample_02_1229 Haematopoietic and lymphoid tissue bone marrow K562_Control 79 20 1400 142 5 43 852 CMBL,CCT5,FAM173B,MARCH6
SE_04_000200236 chr5:10283552-10323965 Sample_04_0002 Blood cold shocked K562 236 7 1184 110 3 34 364 CMBL,CCT5,FAM173B,MARCH6
SE_02_109900046 chr5:10283553-10321473 Sample_02_1099 Haematopoietic and lymphoid tissue bone marrow K562_DMSO_noIFNG 46 22 1107 107 3 32 364 CMBL,CCT5,FAM173B,MARCH6
SE_02_054500128 chr5:10283658-10320942 Sample_02_0545 Bone marrow K562 WT 128 12 1082 103 3 32 364 CMBL,CCT5,FAM173B,MARCH6
SE_02_113000054 chr5:10283658-10321166 Sample_02_1130 Haematopoietic and lymphoid tissue bone marrow K562_??Np63?? expressing 54 11 1089 104 3 32 364 CMBL,CCT5,FAM173B,MARCH6
SE_02_111600178 chr5:10283886-10320835 Sample_02_1116 Haematopoietic and lymphoid tissue bone marrow K562_native 178 10 1076 103 3 32 364 CMBL,CCT5,FAM173B,MARCH6
SE_02_103300086 chr5:10284941-10336529 Sample_02_1033 Haematopoietic and lymphoid tissue bone marrow K562 86 13 1471 112 2 33 364 CMBL,CCT5,FAM173B,MARCH6
SE_02_142200211 chr5:10285191-10304302 Sample_02_1422 Haematopoietic and lymphoid tissue bone marrow K562_Triptolide_0h 211 4 538 56 1 15 189 CMBL,CCT5,FAM173B,MARCH6
SE_01_003900229 chr5:10286537-10320571 Sample_01_0039 Haematopoietic and lymphoid tissue bone marrow K562 229 8 986 96 2 26 317 CMBL,CCT5,FAM173B,MARCH6,6-ar,FA173B,CBL
SE_02_142400418 chr5:10286637-10304456 Sample_02_1424 Haematopoietic and lymphoid tissue bone marrow K562_Triptolide_4h 418 7 498 52 1 14 129 CMBL,CCT5,FAM173B,MARCH6
SE_02_098700081 chr5:10288809-10321548 Sample_02_0987 Blood K562_Control_1 81 15 941 97 2 23 227 CMBL,CCT5,FAM173B,MARCH6
SE_04_000100463 chr5:10288863-10324931 Sample_04_0001 Blood heat shocked K562 463 5 1033 100 2 25 227 CMBL,CCT5,FAM173B,MARCH6
SE_02_098800157 chr5:10291768-10320858 Sample_02_0988 Blood K562_EPZ 157 15 807 72 1 15 175 CMBL,CCT5,FAM173B,MARCH6
SE_02_054600201 chr5:10293118-10320192 Sample_02_0546 Bone marrow K562_MYO1D Non-hub KO 201 8 745 68 1 15 175 CMBL,CCT5,FAM173B,MARCH6
SE_02_142300418 chr5:10295284-10304576 Sample_02_1423 Haematopoietic and lymphoid tissue bone marrow K562_Triptolide_1h 418 4 212 20 0 3 0 CMBL,CCT5,FAM173B,MARCH6
SE_02_122900149 chr5:10348304-10440057 Sample_02_1229 Haematopoietic and lymphoid tissue bone marrow K562_Control 149 52 2298 86 7 207 1657 MARCH6,MIR6131,CMBL,ROPN1L,ROPN1L-AS1,CCT5,FAM173B
SE_04_000200689 chr5:10348992-10377347 Sample_04_0002 Blood cold shocked K562 689 5 778 29 2 36 181 MARCH6,CMBL,CCT5,FAM173B
Genomic distribution of SEs associated with CCT5
Genome Browser

The strength of the tissue affected by the gene

Expression of CCT5

Cell line (ENCODE) Primary cell (ENCODE)Tissue (NCBI) Normal tissue (GTEx) Cell line (CCLE)