SEdb 2.0
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Gene overview

Strategies/Algorithm: lasso Ensembl ID: ENSG00000101220
Gene: C20ORF27 Gene type: protein_coding
Strand: - External links:
Genomic region: chr20:3753508-3767781 Genome Browser:

Super-enhancer search result of gene-based

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SE ID SE Region Sample ID Tissue type Biosample name SE rank Element Common SNP eQTL Risk SNP TFBS CRISPR Cas9 Gene
SE_02_060500823 chr20:3676927-3687720 Sample_02_0605 Skin Skin Fibroblast_DMSO 823 2 356 28 2 30 549 SIGLEC1,ADAM33,HSPA12B,GFRA4,C20orf27,CENPB,SPEF1
SE_02_060600911 chr20:3676962-3687763 Sample_02_0606 Skin Skin Fibroblast_Nutlin3A 911 2 356 28 2 29 548 SIGLEC1,ADAM33,HSPA12B,GFRA4,C20orf27,CENPB,SPEF1
SE_02_059100371 chr20:3795163-3816545 Sample_02_0591 PBMCs adult CD4+CD25-CD45RA+CD27+ naive T cells 371 5 662 85 1 110 2106 CDC25B,LOC101929125,CENPB,C20ORF27,AP5S1,MAVS,SPEF1,C20orf27
SE_02_158200475 chr20:3795196-3813360 Sample_02_1582 Renal OS-RC-2 475 5 562 63 1 105 2106 CDC25B,LOC101929125,CENPB,C20ORF27,AP5S1,MAVS,SPEF1,C20orf27,SIGLEC1,PANK2
SE_02_088300510 chr20:3795266-3819071 Sample_02_0883 Ovary SVOG3e_cells_Dox_12h_transduced with V5-FOXL2 C134W 510 3 739 97 1 113 2106 CDC25B,LOC101929125,CENPB,C20ORF27,AP5S1,MAVS,SPEF1,C20orf27,PANK2,HSPA12B
SE_02_066600292 chr20:3795485-3811747 Sample_02_0666 Prostate RWPE1 Lacz rep1 292 5 505 56 1 93 1932 CDC25B,LOC101929125,CENPB,C20ORF27,AP5S1,MAVS,SPEF1,C20orf27,SIGLEC1,PANK2
SE_02_060500439 chr20:3796391-3813481 Sample_02_0605 Skin Skin Fibroblast_DMSO 439 5 543 59 0 97 1899 CDC25B,LOC101929125,CENPB,C20ORF27,AP5S1,MAVS,SPEF1,C20orf27,SIGLEC1,HSPA12B,PANK2
SE_02_060600489 chr20:3796428-3813449 Sample_02_0606 Skin Skin Fibroblast_Nutlin3A 489 4 541 59 0 97 1882 CDC25B,LOC101929125,CENPB,C20ORF27,AP5S1,MAVS,SPEF1,C20orf27,SIGLEC1,HSPA12B,PANK2
SE_02_066500336 chr20:3796527-3811655 Sample_02_0665 Prostate RWPE1 Schlap1 rep1 336 3 482 50 0 85 1663 CDC25B,LOC101929125,CENPB,C20ORF27,AP5S1,MAVS,SPEF1,C20orf27,SIGLEC1,PANK2
SE_02_087901013 chr20:3796658-3818964 Sample_02_0879 Ovary SVOG3e cells_Dox_12h_control 1013 4 708 89 0 104 1806 CDC25B,LOC101929125,CENPB,C20ORF27,AP5S1,MAVS,SPEF1,C20orf27,PANK2,HSPA12B
SE_02_088000917 chr20:3796828-3813933 Sample_02_0880 Ovary SVOG3e cells_noDox_transduced_V5-FOXL2_WT 917 3 545 62 0 98 1760 CDC25B,LOC101929125,CENPB,C20ORF27,AP5S1,MAVS,SPEF1,C20orf27,PANK2,HSPA12B
SE_02_088100761 chr20:3797939-3819131 Sample_02_0881 Ovary SVOG3e cells_Dox_12h_transduced_V5-FOXL2_WT 761 4 677 88 0 98 1621 CDC25B,LOC101929125,CENPB,C20ORF27,AP5S1,MAVS,SPEF1,C20orf27,PANK2,HSPA12B
SE_02_087801101 chr20:3805022-3813615 Sample_02_0878 Ovary SVOG3e cells_noDox_control 1101 3 270 39 0 18 566 CDC25B,LOC101929125,CENPB,C20ORF27,AP5S1,MAVS,SPEF1,C20orf27,PANK2,HSPA12B
SE_01_010500504 chr20:3805305-3813977 Sample_01_0105 Thyroid gland thyroid gland_54y 504 2 268 42 0 19 507 CDC25B,LOC101929125,CENPB,C20ORF27,AP5S1,MAVS,SPEF1,C20orf27,SIGLEC1,PANK2,HSPA12B
SE_02_062000636 chr20:3806078-3812617 Sample_02_0620 Aortic Aortic Endothelial Cells_DF 636 4 208 30 0 14 369 CDC25B,LOC101929125,CENPB,C20ORF27,AP5S1,MAVS,SPEF1,C20orf27,HSPA12B
Genomic distribution of SEs associated with C20ORF27
Genome Browser

The strength of the tissue affected by the gene

Expression of C20ORF27

Cell line (ENCODE) Primary cell (ENCODE)Tissue (NCBI) Normal tissue (GTEx) Cell line (CCLE)