SEdb 2.0
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Gene overview

Strategies/Algorithm: lasso Ensembl ID: ENSG00000166920
Gene: C15ORF48 Gene type: protein_coding
Strand: + External links:
Genomic region: chr15:45430579-45448761 Genome Browser:

Super-enhancer search result of gene-based

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SE ID SE Region Sample ID Tissue type Biosample name SE rank Element Common SNP eQTL Risk SNP TFBS CRISPR Cas9 Gene
SE_02_047700257 chr15:45430050-45458091 Sample_02_0477 Colon intestinal epithelial organoids_139a 257 9 810 138 3 37 314 C15ORF48,MIR147B,SPATA5L1,SLC30A4,C15orf48
SE_02_047800244 chr15:45430100-45458154 Sample_02_0478 Colon normal colon mucosa 244 14 812 138 3 37 314 C15ORF48,MIR147B,SPATA5L1,SLC30A4,C15orf48
SE_02_092901109 chr15:45438035-45458067 Sample_02_0929 Mid-gestation placenta trophoblast__CytT 1109 14 579 90 1 24 68 SPATA5L1,C15ORF48,MIR147B,SLC30A4,C15orf48
SE_02_093001503 chr15:45438088-45457629 Sample_02_0930 Mid-gestation placenta trophoblast__SynT 1503 20 560 89 1 24 68 SPATA5L1,C15ORF48,MIR147B,SLC30A4,C15orf48
SE_02_049200443 chr15:45438301-45458629 Sample_02_0492 Pharyng Detroit 562_LPS 443 6 580 89 1 24 68 SPATA5L1,C15ORF48,MIR147B,SLC30A4,C15orf48
SE_02_151300294 chr15:45441298-45458173 Sample_02_1513 Lung Transitional AT2->1 cells 294 5 487 70 1 24 68 SPATA5L1,C15ORF48,MIR147B,C15orf48
SE_02_151400173 chr15:45441326-45458204 Sample_02_1514 Lung Differentiated AT1-like cells 173 5 488 70 1 24 68 SPATA5L1,C15ORF48,MIR147B,C15orf48
SE_02_094800647 chr15:45444696-45458218 Sample_02_0948 Pharyng Detroit562 647 2 388 57 1 24 68 SPATA5L1,C15ORF48,MIR147B,SLC30A4,C15orf48
Genomic distribution of SEs associated with C15ORF48
Genome Browser

The strength of the tissue affected by the gene

Expression of C15ORF48

Cell line (ENCODE) Primary cell (ENCODE)Tissue (NCBI) Normal tissue (GTEx) Cell line (CCLE)