SEdb 2.0
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Gene overview

Strategies/Algorithm: lasso Ensembl ID: ENSG00000124508
Gene: BTN2A2 Gene type: protein_coding
Strand: + External links:
Genomic region: chr6:26383096-26394874 Genome Browser:

Super-enhancer search result of gene-based

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SE ID SE Region Sample ID Tissue type Biosample name SE rank Element Common SNP eQTL Risk SNP TFBS CRISPR Cas9 Gene
SE_04_000200381 chr6:26050698-26071985 Sample_04_0002 Blood cold shocked K562 381 4 620 51 9 28 178 HIST1H1C,HFE,HIST1H2AB,HIST1H3C,HIST1H1A,HIST1H3A,HIST1H1T,HIST1H4B,HIST1H2BB,HIST1H4C,HIST1H3B,HIST1H4A,BTN2A2,HIST1H1E,HIST1H2AC
SE_02_113000514 chr6:26051315-26071777 Sample_02_1130 Haematopoietic and lymphoid tissue bone marrow K562_??Np63?? expressing 514 3 602 49 9 28 178 HIST1H1C,HFE,HIST1H2AB,HIST1H3C,HIST1H1A,HIST1H3A,HIST1H1T,HIST1H4B,HIST1H2BB,HIST1H4C,HIST1H3B,HIST1H4A,BTN2A2,HIST1H1E,HIST1H2AC
SE_02_111600643 chr6:26051505-26071668 Sample_02_1116 Haematopoietic and lymphoid tissue bone marrow K562_native 643 5 591 49 9 28 178 HIST1H1C,HFE,HIST1H2AB,HIST1H3C,HIST1H1A,HIST1H3A,HIST1H1T,HIST1H4B,HIST1H2BB,HIST1H4C,HIST1H3B,HIST1H4A,BTN2A2,HIST1H1E,HIST1H2AC
SE_02_054500453 chr6:26051551-26071622 Sample_02_0545 Bone marrow K562 WT 453 4 588 49 9 28 178 HIST1H1C,HFE,HIST1H2AB,HIST1H3C,HIST1H1A,HIST1H3A,HIST1H1T,HIST1H4B,HIST1H2BB,HIST1H4C,HIST1H3B,HIST1H4A,BTN2A2,HIST1H1E,HIST1H2AC
SE_02_122901264 chr6:26051657-26071864 Sample_02_1229 Haematopoietic and lymphoid tissue bone marrow K562_Control 1264 8 595 50 9 28 178 HIST1H1C,HFE,HIST1H2AB,HIST1H3C,HIST1H1A,HIST1H3A,HIST1H1T,HIST1H4B,HIST1H2BB,HIST1H4C,HIST1H3B,HIST1H4A,BTN2A2,HIST1H1E,HIST1H2AC
SE_01_003900654 chr6:26052372-26066616 Sample_01_0039 Haematopoietic and lymphoid tissue bone marrow K562 654 3 448 34 6 28 178 HIST1H1C,HIST1H3B,HIST1H1A,HIST1H4A,HFE,HIST1H3C,HIST1H4B,HIST1H2AB,HIST1H1T,HIST1H3A,HIST1H2BB,HIST1H4C,BTN2A2,HIST1H1E,HIST1H2AC
SE_02_054600307 chr6:26052759-26058666 Sample_02_0546 Bone marrow K562_MYO1D Non-hub KO 307 2 277 16 3 22 178 HIST1H1C,HFE,HIST1H2AB,HIST1H3C,HIST1H1A,HIST1H3A,HIST1H1T,HIST1H4B,HIST1H2BB,HIST1H4C,HIST1H3B,HIST1H4A,BTN2A2,HIST1H1E,HIST1H2AC
SE_02_098800885 chr6:26054096-26071694 Sample_02_0988 Blood K562_EPZ 885 3 521 42 9 28 178 HIST1H1C,HFE,HIST1H2AB,HIST1H3C,HIST1H1A,HIST1H3A,HIST1H1T,HIST1H4B,HIST1H2BB,HIST1H4C,HIST1H3B,HIST1H4A,BTN2A2,HIST1H1E,HIST1H2AC
SE_00_005500213 chr6:26122367-26126857 Sample_00_0055 Spleen spleen 34y 213 1 200 23 5 49 227 HIST1H2AC,HIST1H2BC,HFE,HIST1H2BD,HIST1H1E,HIST1H1T,HIST1H4C,BTN2A2,BTN3A2,HIST1H2AB,HIST1H2BG,HIST1H2BE,HIST1H3A,HIST1H3D,HIST1H3E,HIST1H3B,HIST1H4A,HIST1H4H,HIST1H4B,HIST1H4E,HIST1H1C,HIST1H1D,HIST1H1A,TRIM38,HIST1H2AE,HIST1H2BB
SE_02_122900173 chr6:26280727-26352835 Sample_02_1229 Haematopoietic and lymphoid tissue bone marrow K562_Control 173 43 2048 333 55 0 806 HIST1H4H,BTN3A2,HIST1H2BH,HIST1H4G,BTN2A2,HIST1H3G,HIST1H4F,HIST1H2BI,BTN3A1,HIST1H1D,HIST1H3F,BTN2A1,ABT1,HIST1H2AE,HMGN4,HIST1H2AH,HIST1H2BG,HIST1H4D,HIST1H2AD,HIST1H3D,HIST1H2BK,HIST1H4E
SE_04_000200016 chr6:26282792-26380136 Sample_04_0002 Blood cold shocked K562 16 11 2798 557 75 0 1747 HIST1H4H,BTN3A2,HIST1H2BH,BTN2A2,HIST1H4G,HIST1H3G,HIST1H1D,HIST1H4F,HIST1H2BI,BTN3A1,BTN2A3P,HIST1H3F,BTN2A1,ABT1,HIST1H2BD,HIST1H2AE,HMGN4,HIST1H2AH,HIST1H2BG,HIST1H4D,HIST1H2AD,HIST1H3D,HIST1H2BK,HIST1H4E
SE_01_003900016 chr6:26282954-26352937 Sample_01_0039 Haematopoietic and lymphoid tissue bone marrow K562 16 17 2011 331 55 0 723 HIST1H4H,BTN2A2,BTN3A1,HIST1H3F,HIST1H2BI,BTN3A2,HIST1H2BH,HIST1H4G,HIST1H3G,HIST1H4F,HIST1H1D,ABT1,BTN2A1,HIST1H2AD,HIST1H2AE,HIST1H2AH,HIST1H2BG,HIST1H2BK,HIST1H3D,HIST1H4D,HIST1H4E,HGN4,BTN2A3P,HIST1H2BE,HIST1H2BF
SE_04_000100091 chr6:26283090-26354535 Sample_04_0001 Blood heat shocked K562 91 10 2053 341 56 0 723 HIST1H4H,BTN3A2,HIST1H2BH,HIST1H4G,BTN2A2,HIST1H3G,HIST1H4F,HIST1H2BI,BTN3A1,HIST1H1D,HIST1H3F,BTN2A1,ABT1,HIST1H2AE,HMGN4,HIST1H2AH,HIST1H2BG,HIST1H4D,HIST1H2AD,HIST1H3D,HIST1H2BK,HIST1H4E
SE_02_103300018 chr6:26283336-26352836 Sample_02_1033 Haematopoietic and lymphoid tissue bone marrow K562 18 12 1997 330 55 0 723 HIST1H4H,BTN3A2,HIST1H2BH,HIST1H4G,BTN2A2,HIST1H3G,HIST1H4F,HIST1H2BI,BTN3A1,HIST1H1D,HIST1H3F,BTN2A1,ABT1,HIST1H2AE,HMGN4,HIST1H2AH,HIST1H2BG,HIST1H4D,HIST1H2AD,HIST1H3D,HIST1H2BK,HIST1H4E
SE_02_054600008 chr6:26283477-26352702 Sample_02_0546 Bone marrow K562_MYO1D Non-hub KO 8 21 1992 330 55 0 723 HIST1H4H,BTN3A2,HIST1H2BH,HIST1H4G,BTN2A2,HIST1H3G,HIST1H4F,HIST1H2BI,BTN3A1,HIST1H1D,HIST1H3F,BTN2A1,ABT1,HIST1H2AE,HMGN4,HIST1H2AH,HIST1H2BG,HIST1H4D,HIST1H2AD,HIST1H3D,HIST1H2BK,HIST1H4E
SE_02_111600052 chr6:26294484-26354520 Sample_02_1116 Haematopoietic and lymphoid tissue bone marrow K562_native 52 29 1631 283 41 0 572 BTN3A2,HIST1H2BH,HIST1H4G,BTN2A2,HIST1H3G,HIST1H2BI,HIST1H4H,BTN3A1,HIST1H3F,BTN2A1,ABT1,HIST1H2AE,HMGN4,HIST1H2AH,HIST1H2BG,HIST1H4D,HIST1H2AD,HIST1H3D,HIST1H2BK,HIST1H4E
SE_02_098700023 chr6:26294643-26354575 Sample_02_0987 Blood K562_Control_1 23 25 1626 284 42 0 572 BTN3A2,HIST1H2BH,HIST1H4G,BTN2A2,HIST1H3G,HIST1H2BI,HIST1H4H,BTN3A1,HIST1H3F,BTN2A1,ABT1,HIST1H2AE,HMGN4,HIST1H2AH,HIST1H2BG,HIST1H4D,HIST1H2AD,HIST1H3D,HIST1H2BK,HIST1H4E
SE_02_054500050 chr6:26294760-26352846 Sample_02_0545 Bone marrow K562 WT 50 16 1573 272 40 0 572 BTN3A2,HIST1H2BH,HIST1H4G,BTN2A2,HIST1H3G,HIST1H2BI,HIST1H4H,BTN3A1,HIST1H3F,BTN2A1,ABT1,HIST1H2AE,HMGN4,HIST1H2AH,HIST1H2BG,HIST1H4D,HIST1H2AD,HIST1H3D,HIST1H2BK,HIST1H4E
SE_02_098800019 chr6:26295070-26354558 Sample_02_0988 Blood K562_EPZ 19 29 1615 283 42 0 572 BTN3A2,HIST1H2BH,HIST1H4G,BTN2A2,HIST1H3G,HIST1H2BI,HIST1H4H,BTN3A1,HIST1H3F,BTN2A1,ABT1,HIST1H2AE,HMGN4,HIST1H2AH,HIST1H2BG,HIST1H4D,HIST1H2AD,HIST1H3D,HIST1H2BK,HIST1H4E
SE_02_109900069 chr6:26295137-26359725 Sample_02_1099 Haematopoietic and lymphoid tissue bone marrow K562_DMSO_noIFNG 69 37 1726 319 44 0 572 BTN3A2,HIST1H2BH,HIST1H4G,BTN2A2,HIST1H3G,HIST1H2BI,HIST1H4H,BTN3A1,HIST1H3F,BTN2A1,ABT1,HIST1H2AE,HMGN4,HIST1H2AH,HIST1H2BG,HIST1H4D,HIST1H2AD,HIST1H3D,HIST1H2BK,HIST1H4E
SE_02_113000070 chr6:26295318-26352795 Sample_02_1130 Haematopoietic and lymphoid tissue bone marrow K562_??Np63?? expressing 70 21 1557 271 40 0 572 BTN3A2,HIST1H2BH,HIST1H4G,BTN2A2,HIST1H3G,HIST1H2BI,HIST1H4H,BTN3A1,HIST1H3F,BTN2A1,ABT1,HIST1H2AE,HMGN4,HIST1H2AH,HIST1H2BG,HIST1H4D,HIST1H2AD,HIST1H3D,HIST1H2BK,HIST1H4E
Genomic distribution of SEs associated with BTN2A2
Genome Browser

The strength of the tissue affected by the gene

Expression of BTN2A2

Cell line (ENCODE) Primary cell (ENCODE)Tissue (NCBI) Normal tissue (GTEx) Cell line (CCLE)