SEdb 2.0
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Gene overview

Strategies/Algorithm: lasso Ensembl ID: ENSG00000128524
Gene: ATP6V1F Gene type: protein_coding
Strand: + External links:
Genomic region: chr7:128862856-128865847 Genome Browser:

Super-enhancer search result of gene-based

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SE ID SE Region Sample ID Tissue type Biosample name SE rank Element Common SNP eQTL Risk SNP TFBS CRISPR Cas9 Gene
SE_01_011501174 chr7:128728210-128767837 Sample_01_0115 Skeletal Muscle myotube originated from skeletal muscle myoblast 1174 6 1033 144 1 142 749 CALU,FAM71F1,CCDC136,OPN1SW,ATP6V1F,FLNC,FAM71F2
SE_02_054500327 chr7:128826399-128833794 Sample_02_0545 Bone marrow K562 WT 327 1 196 19 1 137 242 FLNC,CCDC136,ATP6V1F,LOC100130705,OPN1SW
SE_02_103300599 chr7:128826504-128833740 Sample_02_1033 Haematopoietic and lymphoid tissue bone marrow K562 599 1 190 19 1 137 242 FLNC,CCDC136,ATP6V1F,LOC100130705,OPN1SW
SE_00_005700193 chr7:128826513-128840265 Sample_00_0057 Heart right ventricle 3y 193 15 391 34 3 223 999 FLNC,CCDC136,ATP6V1F,LOC100130705,OPN1SW,KCP
SE_02_113900602 chr7:128826618-128834894 Sample_02_1139 Retinal Pigmented Epithelial RPE1-anaphase/telophase 602 1 223 17 1 146 242 FLNC,CCDC136,ATP6V1F,LOC100130705
SE_04_000200452 chr7:128826637-128842193 Sample_04_0002 Blood cold shocked K562 452 2 452 36 3 252 1384 FLNC,CCDC136,ATP6V1F,LOC100130705,OPN1SW
SE_02_142400151 chr7:128826687-128833780 Sample_02_1424 Haematopoietic and lymphoid tissue bone marrow K562_Triptolide_4h 151 2 185 17 1 137 242 FLNC,CCDC136,ATP6V1F,LOC100130705,OPN1SW
SE_01_011500740 chr7:128826932-128837166 Sample_01_0115 Skeletal Muscle myotube originated from skeletal muscle myoblast 740 4 291 20 2 179 429 FLNC,CCDC136,ATP6V1F,LOC100130705,CALU,OPN1SW
SE_02_054700217 chr7:128826996-128833185 Sample_02_0547 Bone marrow K562_MYO1D_Hub_KO 217 3 162 17 1 122 242 FLNC,CCDC136,ATP6V1F,LOC100130705,OPN1SW
SE_02_060501193 chr7:128827016-128836835 Sample_02_0605 Skin Skin Fibroblast_DMSO 1193 4 278 20 2 179 387 FLNC,CCDC136,ATP6V1F,LOC100130705,CALU,OPN1SW
SE_02_113800672 chr7:128827063-128834962 Sample_02_1138 Retinal Pigmented Epithelial RPE1-prometaphase 672 1 213 17 1 146 242 FLNC,CCDC136,ATP6V1F,LOC100130705
SE_02_060601018 chr7:128827147-128836959 Sample_02_0606 Skin Skin Fibroblast_Nutlin3A 1018 4 278 20 2 179 387 FLNC,CCDC136,ATP6V1F,LOC100130705,CALU,OPN1SW
SE_02_113000420 chr7:128827151-128834116 Sample_02_1130 Haematopoietic and lymphoid tissue bone marrow K562_??Np63?? expressing 420 2 183 17 1 142 242 FLNC,CCDC136,ATP6V1F,LOC100130705,OPN1SW
SE_04_000100283 chr7:128827219-128842505 Sample_04_0001 Blood heat shocked K562 283 2 446 36 3 253 1464 FLNC,CCDC136,ATP6V1F,LOC100130705,OPN1SW
SE_02_142300183 chr7:128827251-128833746 Sample_02_1423 Haematopoietic and lymphoid tissue bone marrow K562_Triptolide_1h 183 3 168 17 1 134 242 FLNC,CCDC136,ATP6V1F,LOC100130705,OPN1SW
SE_02_111600316 chr7:128827296-128834107 Sample_02_1116 Haematopoietic and lymphoid tissue bone marrow K562_native 316 2 178 17 1 140 242 FLNC,CCDC136,ATP6V1F,LOC100130705,OPN1SW
SE_02_122901429 chr7:128827317-128840805 Sample_02_1229 Haematopoietic and lymphoid tissue bone marrow K562_Control 1429 7 397 33 3 227 1119 FLNC,CCDC136,ATP6V1F,LOC100130705,OPN1SW
SE_02_054600415 chr7:128827871-128833352 Sample_02_0546 Bone marrow K562_MYO1D Non-hub KO 415 2 141 16 1 103 242 FLNC,CCDC136,ATP6V1F,LOC100130705,OPN1SW
SE_02_142200242 chr7:128828003-128833271 Sample_02_1422 Haematopoietic and lymphoid tissue bone marrow K562_Triptolide_0h 242 2 136 15 1 103 242 FLNC,CCDC136,ATP6V1F,LOC100130705,OPN1SW
SE_02_062800098 chr7:128830035-128842642 Sample_02_0628 Brain CHP-134 98 4 375 26 3 208 1499 FLNC,CCDC136,ATP6V1F,LOC100130705,CALU,OPN1SW,KCP
SE_02_142900392 chr7:128932404-128968257 Sample_02_1429 Blood GM12878_WT 392 9 953 117 13 146 1766 TNPO3,IRF5,KCP,TSPAN33,LOC100130705,ATP6V1F
Genomic distribution of SEs associated with ATP6V1F
Genome Browser

The strength of the tissue affected by the gene

Expression of ATP6V1F

Cell line (ENCODE) Primary cell (ENCODE)Tissue (NCBI) Normal tissue (GTEx) Cell line (CCLE)