SEdb 2.0
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Gene overview

Strategies/Algorithm: lasso Ensembl ID: ENSG00000118217
Gene: ATF6 Gene type: protein_coding
Strand: + External links:
Genomic region: chr1:161766320-161964070 Genome Browser:

Super-enhancer search result of gene-based

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SE ID SE Region Sample ID Tissue type Biosample name SE rank Element Common SNP eQTL Risk SNP TFBS CRISPR Cas9 Gene
SE_02_127600059 chr1:161485048-161540144 Sample_02_1276 Prostate PC3_GSK126 59 29 1691 162 16 37 1497 FCGR2A,HSPA6,FCGR3A,FCGR2C,ATF6
SE_02_127500219 chr1:161486717-161540103 Sample_02_1275 Prostate PC3_Vorinostat 219 25 1649 159 16 37 1489 FCGR2A,HSPA6,FCGR3A,FCGR2C,ATF6
SE_02_102400220 chr1:161500653-161540209 Sample_02_1024 Prostate PC3 cells 220 9 1299 124 9 37 1500 FCGR2A,HSPA6,FCGR3A,FCGR2C,ATF6
SE_02_127700053 chr1:161502673-161539791 Sample_02_1277 Prostate PC3_COMBO 53 18 1227 120 7 34 1486 FCGR2A,HSPA6,FCGR3A,FCGR2C,ATF6
SE_02_127400093 chr1:161509995-161540048 Sample_02_1274 Prostate PC3_DMSO 93 18 1007 93 4 22 1194 FCGR2A,HSPA6,FCGR3A,FCGR2C,ATF6
SE_04_000200485 chr1:161529333-161597694 Sample_04_0002 Blood cold shocked K562 485 12 1651 175 2 120 1653 FCGR3A,FCGR2C,HSPA6,FCGR3B,FCGR2A,HSPA7,FCGR2B,ATF6,FCRLB
SE_02_103300476 chr1:161529336-161596217 Sample_02_1033 Haematopoietic and lymphoid tissue bone marrow K562 476 12 1624 168 2 120 1653 FCGR3A,FCGR2C,HSPA6,FCGR3B,FCGR2A,HSPA7,FCGR2B,ATF6,FCRLB
SE_02_098700083 chr1:161529396-161595508 Sample_02_0987 Blood K562_Control_1 83 18 1589 156 2 119 1614 FCGR3A,FCGR2C,HSPA6,FCGR3B,FCGR2A,HSPA7,FCGR2B,ATF6,FCRLB
SE_02_054500153 chr1:161529445-161597309 Sample_02_0545 Bone marrow K562 WT 153 15 1645 171 2 120 1653 FCGR3A,FCGR2C,HSPA6,FCGR3B,FCGR2A,HSPA7,FCGR2B,ATF6,FCRLB
SE_02_111600265 chr1:161529449-161587230 Sample_02_1116 Haematopoietic and lymphoid tissue bone marrow K562_native 265 12 1306 120 2 90 1013 FCGR3A,FCGR2C,HSPA6,FCGR3B,FCGR2A,HSPA7,FCGR2B,ATF6,FCRLB
SE_02_109900241 chr1:161529489-161595647 Sample_02_1099 Haematopoietic and lymphoid tissue bone marrow K562_DMSO_noIFNG 241 27 1595 160 2 120 1635 FCGR3A,FCGR2C,HSPA6,FCGR3B,FCGR2A,HSPA7,FCGR2B,ATF6,FCRLB
SE_02_098800094 chr1:161529548-161597200 Sample_02_0988 Blood K562_EPZ 94 15 1635 169 2 120 1653 FCGR3A,FCGR2C,HSPA6,FCGR3B,FCGR2A,HSPA7,FCGR2B,ATF6,FCRLB
SE_00_005500511 chr1:161529587-161563412 Sample_00_0055 Spleen spleen 34y 511 15 1031 89 1 66 904 FCGR3A,FCGR2A,HSPA7,HSPA6,FCGR2C,FCGR3B,ATF6
SE_01_010400910 chr1:161529919-161563320 Sample_01_0104 Lung upper lobe of left lung 910 7 1021 88 1 66 904 FCGR3A,FCGR2A,HSPA7,HSPA6,FCGR2C,FCGR3B,SDHC,ATF6
SE_02_127600064 chr1:161554790-161614559 Sample_02_1276 Prostate PC3_GSK126 64 34 1314 178 1 64 1647 HSPA7,FCGR2C,HSPA6,FCGR2A,FCGR3B,FCGR3A,FCGR2B,ATF6
SE_02_127700081 chr1:161588271-161624379 Sample_02_1277 Prostate PC3_COMBO 81 17 1211 214 0 47 1757 FCGR3B,HSPA7,FCGR2C,FCGR3A,FCGR2B,ATF6
SE_02_127500370 chr1:161588897-161622239 Sample_02_1275 Prostate PC3_Vorinostat 370 16 1136 194 0 35 1523 HSPA7,FCGR2C,FCGR3B,FCGR3A,FCGR2B,ATF6
SE_02_127400101 chr1:161588945-161621466 Sample_02_1274 Prostate PC3_DMSO 101 21 1097 188 0 35 1459 HSPA7,FCGR2C,FCGR3B,FCGR3A,FCGR2B,ATF6
SE_04_000100499 chr1:161588989-161654388 Sample_04_0001 Blood heat shocked K562 499 14 2119 352 0 99 2263 FCGR3B,HSPA7,FCGR2C,RPL31P11,FCGR2B,FCGR3A,ATF6,FCRLA,FCGR2A,FCRLB,HSPA6
SE_02_102400326 chr1:161589371-161613452 Sample_02_1024 Prostate PC3 cells 326 7 809 121 0 32 1457 HSPA7,FCGR2C,FCGR3B,FCGR3A,FCGR2B,ATF6
SE_02_103300512 chr1:161610141-161651742 Sample_02_1033 Haematopoietic and lymphoid tissue bone marrow K562 512 5 1356 234 0 67 903 FCGR3B,RPL31P11,FCGR2C,FCGR2B,HSPA7,ATF6,FCRLA,FCGR2A,FCRLB,FCGR3A
SE_04_000200507 chr1:161610676-161668426 Sample_04_0002 Blood cold shocked K562 507 9 1475 262 0 82 1021 FCGR2B,FCGR3B,FCRLA,RPL31P11,FCGR2C,HSPA7,DUSP12,ATF6,FCGR2A,FCRLB,HSPA6,FCGR3A
SE_02_054500256 chr1:161610847-161648168 Sample_02_0545 Bone marrow K562 WT 256 8 1252 213 0 67 903 FCGR3B,RPL31P11,FCGR2C,FCGR2B,HSPA7,ATF6,FCRLA,FCGR2A,FCRLB,FCGR3A
SE_02_098700095 chr1:161610963-161671592 Sample_02_0987 Blood K562_Control_1 95 20 1520 269 0 90 1169 FCGR2B,FCGR3B,FCRLA,RPL31P11,FCRLB,FCGR2C,HSPA7,DUSP12,ATF6,FCGR2A,HSPA6,FCGR3A
SE_02_098800140 chr1:161610992-161654223 Sample_02_0988 Blood K562_EPZ 140 12 1391 241 0 67 903 FCGR3B,RPL31P11,FCGR2C,FCGR2B,HSPA7,ATF6,FCRLA,FCGR2A,FCRLB,FCGR3A
SE_02_111600420 chr1:161611031-161647619 Sample_02_1116 Haematopoietic and lymphoid tissue bone marrow K562_native 420 5 1226 208 0 66 903 FCGR3B,RPL31P11,FCGR2C,FCGR2B,HSPA7,ATF6,FCRLA,FCGR2A,FCRLB,FCGR3A
SE_02_113000653 chr1:161611055-161626259 Sample_02_1130 Haematopoietic and lymphoid tissue bone marrow K562_??Np63?? expressing 653 2 537 108 0 17 429 FCGR3B,FCGR2C,HSPA7,FCGR2B,ATF6,FCGR2A,FCGR3A
SE_02_109900255 chr1:161611090-161671672 Sample_02_1099 Haematopoietic and lymphoid tissue bone marrow K562_DMSO_noIFNG 255 16 1518 269 0 90 1182 FCGR2B,FCGR3B,FCRLA,RPL31P11,FCRLB,FCGR2C,HSPA7,DUSP12,ATF6,FCGR2A,HSPA6,FCGR3A
SE_01_003900102 chr1:161611112-161648401 Sample_01_0039 Haematopoietic and lymphoid tissue bone marrow K562 102 5 1244 213 0 67 903 FCGR3B,FCGR2C,HSPA7,FCGR2B,RPL31P11,ATF6,FCGR2A,FCGR3A,FCRLA,FCRLB,HSPA6
SE_02_054700208 chr1:161611127-161625307 Sample_02_0547 Bone marrow K562_MYO1D_Hub_KO 208 4 514 105 0 17 383 FCGR3B,FCGR2C,HSPA7,FCGR2B,ATF6,FCGR2A,FCGR3A
SE_02_142200347 chr1:161611291-161626032 Sample_02_1422 Haematopoietic and lymphoid tissue bone marrow K562_Triptolide_0h 347 6 521 107 0 17 397 FCGR3B,FCGR2C,HSPA7,FCGR2B,ATF6,FCGR2A,FCGR3A
SE_02_127700305 chr1:161726339-161744212 Sample_02_1277 Prostate PC3_COMBO 305 10 500 88 3 28 418 FCRLB,ATF6,RPL31P11,DUSP12,FCRLA
Genomic distribution of SEs associated with ATF6
Genome Browser

The strength of the tissue affected by the gene

Expression of ATF6

Cell line (ENCODE) Primary cell (ENCODE)Tissue (NCBI) Normal tissue (GTEx) Cell line (CCLE)