SEdb 2.0
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Gene overview

Strategies/Algorithm: lasso Ensembl ID: ENSG00000204305
Gene: AGER Gene type: protein_coding
Strand: - External links:
Genomic region: chr6:32180968-32184322 Genome Browser:

Super-enhancer search result of gene-based

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SE ID SE Region Sample ID Tissue type Biosample name SE rank Element Common SNP eQTL Risk SNP TFBS CRISPR Cas9 Gene
SE_00_002200175 chr6:32070467-32130508 Sample_00_0022 Lung lung_30y 175 13 1295 124 39 471 3974 TNXB,ATF6B,FKBPL,AGPAT1,RNF5,PPT2,RNF5P1,PRRT1,EGFL8,LOC100507547,AGER,C4B,NOTCH4
SE_00_001100238 chr6:32175136-32197679 Sample_00_0011 Esophagus esophagus 238 4 514 58 38 325 4101 AGER,PBX2,RNF5,RNF5P1,GPSM3,AGPAT1,NOTCH4,ATF6B,FKBPL,PPT2,EGFL8,PRRT1,LOC100507547,GPS3,TNXB
SE_00_003900105 chr6:32175215-32197872 Sample_00_0039 Spleen spleen_3y 105 5 517 59 38 325 4110 AGER,PBX2,RNF5,RNF5P1,GPSM3,AGPAT1,NOTCH4,ATF6B,FKBPL,PPT2,EGFL8,PRRT1,LOC100507547,C4B,CYP21A2,GPS3
SE_00_004000066 chr6:32175351-32197803 Sample_00_0040 Spleen spleen_30y 66 5 514 58 38 325 4110 AGER,PBX2,RNF5,RNF5P1,GPSM3,AGPAT1,NOTCH4,ATF6B,FKBPL,PPT2,EGFL8,PRRT1,LOC100507547,C4B,CYP21A2,GPS3
Genomic distribution of SEs associated with AGER
Genome Browser

The strength of the tissue affected by the gene

Expression of AGER

Cell line (ENCODE) Primary cell (ENCODE)Tissue (NCBI) Normal tissue (GTEx) Cell line (CCLE)