SEdb 2.0
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Gene overview

Strategies/Algorithm: lasso Ensembl ID: ENSG00000158859
Gene: ADAMTS4 Gene type: protein_coding
Strand: - External links:
Genomic region: chr1:161184302-161199054 Genome Browser:

Super-enhancer search result of gene-based

GREAT Download bed
SE ID SE Region Sample ID Tissue type Biosample name SE rank Element Common SNP eQTL Risk SNP TFBS CRISPR Cas9 Gene
SE_02_089500448 chr1:161197053-161208244 Sample_02_0895 Heart left ventricle_LV1259 448 5 292 19 2 102 709 NDUFS2,ADAMTS4,FCER1G,B4GALT3,MIR5187,TOMM40L,NR1I3,PPOX,USP21,UFC1,APOA2,PCP4L1,PFDN2,KLHDC9
SE_00_005200811 chr1:161199165-161217920 Sample_00_0052 Heart left ventricle 3y 811 4 504 38 4 109 1147 FCER1G,NDUFS2,B4GALT3,MIR5187,PPOX,TOMM40L,PCP4L1,USP21,UFC1,APOA2,NR1I3,ADAMTS4,PFDN2,KLHDC9
SE_02_127500193 chr1:161381234-161404337 Sample_02_1275 Prostate PC3_Vorinostat 193 26 573 87 1 0 94 CFAP126,TOMM40L,SDHC,ADAMTS4
SE_02_085900220 chr1:161381297-161403861 Sample_02_0859 Prostate PC3 220 6 554 85 1 0 94 CFAP126,TOMM40L,SDHC,ADAMTS4
SE_02_127600196 chr1:161381297-161405790 Sample_02_1276 Prostate PC3_GSK126 196 20 612 89 1 0 94 CFAP126,TOMM40L,SDHC,ADAMTS4
SE_02_127400157 chr1:161381409-161403760 Sample_02_1274 Prostate PC3_DMSO 157 13 547 82 1 0 94 CFAP126,TOMM40L,SDHC,ADAMTS4
SE_02_127700160 chr1:161381627-161403283 Sample_02_1277 Prostate PC3_COMBO 160 18 532 80 1 0 94 CFAP126,TOMM40L,SDHC,ADAMTS4
SE_02_071600579 chr1:161381724-161402943 Sample_02_0716 Pancreas SUIT2_GFP 579 6 520 76 1 0 94 CFAP126,NIT1,ADAMTS4,USP21,UFC1
SE_02_071900498 chr1:161381775-161401069 Sample_02_0719 Pancreas SUIT2_TP63dN_DOX 498 5 470 65 1 0 94 CFAP126,NIT1,ADAMTS4,USP21,UFC1
Genomic distribution of SEs associated with ADAMTS4
Genome Browser

The strength of the tissue affected by the gene

Expression of ADAMTS4

Cell line (ENCODE) Primary cell (ENCODE)Tissue (NCBI) Normal tissue (GTEx) Cell line (CCLE)