SEdb 2.0
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Gene overview

Strategies/Algorithm: lasso Ensembl ID: ENSG00000124608
Gene: AARS2 Gene type: protein_coding
Strand: - External links:
Genomic region: chr6:44298731-44313347 Genome Browser:

Super-enhancer search result of gene-based

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SE ID SE Region Sample ID Tissue type Biosample name SE rank Element Common SNP eQTL Risk SNP TFBS CRISPR Cas9 Gene
SE_02_092300251 chr6:44216972-44250292 Sample_02_0923 Heart fetal heart_PCW10_12522 251 10 976 81 6 159 2218 SLC29A1,HSP90AB1,SLC35B2,TMEM151B,TCTE1,NFKBIE,MIR4647,CDC5L,AARS2
SE_02_092200369 chr6:44217216-44249008 Sample_02_0922 Heart fetal heart_PCW10_12434 369 8 927 74 4 137 2100 SLC29A1,HSP90AB1,SLC35B2,TMEM151B,TCTE1,NFKBIE,MIR4647,CDC5L,AARS2
SE_01_003900474 chr6:44221050-44250040 Sample_01_0039 Haematopoietic and lymphoid tissue bone marrow K562 474 4 881 70 5 144 1995 SLC29A1,HSP90AB1,SLC35B2,NFKBIE,TMEM151B,TCTE1,AARS2,CAPN11,CDC5L,GTPBP2,AD2L1BP,SPATS1,TE63B
SE_02_109900381 chr6:44221177-44249396 Sample_02_1099 Haematopoietic and lymphoid tissue bone marrow K562_DMSO_noIFNG 381 4 854 65 3 125 1930 SLC29A1,HSP90AB1,SLC35B2,TMEM151B,TCTE1,NFKBIE,MIR4647,CDC5L,AARS2,MAD2L1BP,TMEM63B,CAPN11,GTPBP2,SPATS1
SE_02_111600790 chr6:44221241-44249439 Sample_02_1116 Haematopoietic and lymphoid tissue bone marrow K562_native 790 4 854 65 3 124 1936 SLC29A1,HSP90AB1,SLC35B2,TMEM151B,TCTE1,NFKBIE,MIR4647,CDC5L,AARS2,MAD2L1BP,TMEM63B,CAPN11,GTPBP2,SPATS1
SE_02_113000548 chr6:44221244-44249333 Sample_02_1130 Haematopoietic and lymphoid tissue bone marrow K562_??Np63?? expressing 548 4 853 65 3 123 1926 SLC29A1,HSP90AB1,SLC35B2,TMEM151B,TCTE1,NFKBIE,MIR4647,CDC5L,AARS2,MAD2L1BP,TMEM63B,CAPN11,GTPBP2,SPATS1
SE_04_000100414 chr6:44244146-44251131 Sample_04_0001 Blood heat shocked K562 414 1 265 26 2 75 516 HSP90AB1,SLC29A1,SLC35B2,TMEM151B,TCTE1,NFKBIE,MIR4647,CDC5L,AARS2,MAD2L1BP,TMEM63B,CAPN11,GTPBP2,SPATS1
Genomic distribution of SEs associated with AARS2
Genome Browser

The strength of the tissue affected by the gene

Expression of AARS2

Cell line (ENCODE) Primary cell (ENCODE)Tissue (NCBI) Normal tissue (GTEx) Cell line (CCLE)