SEdb 2.0
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Gene overview

Strategies/Algorithm: closest_active Ensembl ID: ENSG00000118369
Gene: USP35 Gene type: protein_coding
Strand: + External links:
Genomic region: chr11:78188812-78215232 Genome Browser:

Super-enhancer search result of gene-based

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SE ID SE Region Sample ID Tissue type Biosample name SE rank Element Common SNP eQTL Risk SNP TFBS CRISPR Cas9 Gene
SE_01_009300194 chr11:78149212-78271853 Sample_01_0093 Aorta ascending aorta 194 37 3814 387 36 433 3860 KCTD21,KCTD21-AS1,USP35,GAB2,ALG8
SE_02_053300156 chr11:78149917-78232853 Sample_02_0533 Blood vessel Circle of Willis_54y 156 27 2714 249 27 342 3783 KCTD21,KCTD21-AS1,USP35,GAB2,ALG8
SE_02_074700382 chr11:78152027-78232480 Sample_02_0747 Embryo ES derived ventricular cardiomyocyte_day80 382 35 2650 239 26 342 3783 KCTD21,KCTD21-AS1,USP35,GAB2,ALG8
SE_01_008600261 chr11:78155930-78270583 Sample_01_0086 Thoracic aorta thoracic-aorta 261 15 3555 352 36 426 3856 KCTD21,GAB2,USP35,ALG8
SE_02_104900555 chr11:78162824-78220422 Sample_02_1049 Peripheral blood CD4+ cell_ROMI 555 36 1954 181 18 271 3308 KCTD21,KCTD21-AS1,USP35,GAB2,ALG8
SE_00_005100169 chr11:78163390-78231659 Sample_00_0051 Adrenal gland adrenal gland 30y 169 32 2294 205 25 322 3783 KCTD21,KCTD21-AS1,USP35,GAB2,ALG8
SE_02_074500615 chr11:78166478-78213617 Sample_02_0745 Embryo ES derived cardiac progenitor cells_day7 615 12 1544 132 5 232 2214 KCTD21,KCTD21-AS1,USP35,ALG8
SE_02_104700922 chr11:78172045-78226958 Sample_02_1047 Peripheral blood CD4+ cells_CTCL1181 922 21 1906 178 20 294 3618 KCTD21,KCTD21-AS1,USP35,GAB2,ALG8
SE_02_104301561 chr11:78179689-78213365 Sample_02_1043 Peripheral blood Peripheral blood cells_CTCL1200 1561 14 1111 95 4 175 1603 KCTD21,USP35,KCTD21-AS1,ALG8
SE_02_013200830 chr11:78185080-78206482 Sample_02_0132 Lung 1015_CL 830 3 669 47 2 146 1088 KCTD21,USP35,ALG8
SE_02_013100690 chr11:78185213-78206668 Sample_02_0131 Lung 1015_PT 690 3 676 47 2 146 1088 KCTD21,USP35,ALG8
SE_01_010600537 chr11:78185336-78193175 Sample_01_0106 Adrenal gland adrenal gland 54y 537 4 226 21 0 35 252 KCTD21,USP35,KCTD21-AS1,ALG8
SE_02_155100493 chr11:78188858-78203878 Sample_02_1551 Gastrointestinal Stromal MaMel 493 7 466 31 1 121 856 USP35,KCTD21-AS1,ALG8,KCTD21
SE_02_104801116 chr11:78197825-78221875 Sample_02_1048 Peripheral blood CD4+ cell_UNTREATED 1116 13 974 87 17 107 2338 GAB2,USP35,KCTD21
SE_02_090801113 chr11:78208331-78271927 Sample_02_0908 Heart left ventricle_DCM_LV1262 1113 23 2037 229 33 199 2079 GAB2,USP35,KCTD21
SE_02_095600440 chr11:78212516-78272261 Sample_02_0956 Brain IDH1_2658 440 18 1856 213 31 176 1665 GAB2,USP35,KCTD21
SE_01_011000752 chr11:78214793-78270127 Sample_01_0110 Aorta thoracic aorta_37y 752 21 1638 184 28 163 1410 GAB2,KCTD21,USP35
SE_02_155100574 chr11:78229594-78245821 Sample_02_1551 Gastrointestinal Stromal MaMel 574 6 458 51 7 0 0 GAB2,KCTD21,USP35
SE_02_046500760 chr11:78251172-78314212 Sample_02_0465 Adipose subcutaneous adipocytes 760 29 1778 194 26 145 92 GAB2,USP35
Genomic distribution of SEs associated with USP35
Genome Browser

The strength of the tissue affected by the gene

Expression of USP35

Cell line (ENCODE) Primary cell (ENCODE)Tissue (NCBI) Normal tissue (GTEx) Cell line (CCLE)