SEdb 2.0
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Gene overview

Strategies/Algorithm: closest_active Ensembl ID: ENSG00000196683
Gene: TOMM7 Gene type: protein_coding
Strand: - External links:
Genomic region: chr7:22812628-22822852 Genome Browser:

Super-enhancer search result of gene-based

GREAT Download bed
SE ID SE Region Sample ID Tissue type Biosample name SE rank Element Common SNP eQTL Risk SNP TFBS CRISPR Cas9 Gene
SE_02_061001566 chr7:22759178-22792215 Sample_02_0610 Liposarcoma MLS 1765-92 1566 8 1034 130 4 0 0 LOC541472,TOMM7,IL6
SE_02_040800258 chr7:22780817-22824338 Sample_02_0408 Kidney G401_Dox 258 7 1454 203 7 16 223 TOMM7,SNORD93
SE_02_075300074 chr7:22781936-22834243 Sample_02_0753 Embryo ES-derived progenitors_FG type 74 10 1679 245 8 21 223 TOMM7,SNORD93
SE_02_028600602 chr7:22782097-22792321 Sample_02_0286 Liver HuH7_IL-1alpha_1h 602 2 350 34 1 0 0 TOMM7
SE_02_149300001 chr7:22782333-22877489 Sample_02_1493 Skin SK-MEL-5_DMSO_6h 1 24 2888 407 10 60 265 SNORD93,TOMM7
SE_02_075400614 chr7:22782387-22788811 Sample_02_0754 Embryo ES-derived progenitors Pancreatic Progenitors 1 WT 614 2 210 21 1 0 0 TOMM7
SE_02_075701046 chr7:22782457-22787839 Sample_02_0757 Embryo ES-derived progenitors_FOXA2 -/- 1046 1 177 17 1 0 0 TOMM7
SE_02_049500366 chr7:22782503-22788295 Sample_02_0495 Islets differentiated hESCs Early LSD1 inhibition PP2 366 2 191 20 1 0 0 TOMM7
SE_02_049400794 chr7:22782546-22788425 Sample_02_0494 Islets differentiated hESCs Late pancreatic progenitor cells 794 2 191 20 1 0 0 TOMM7
SE_02_047600528 chr7:22782782-22820614 Sample_02_0476 iPSCs hiPSC derived hepatocyte-like cells 528 18 1285 170 6 8 124 TOMM7,SNORD93
SE_02_020700633 chr7:22783524-22803867 Sample_02_0207 Stomach FU97 633 6 772 88 1 0 0 TOMM7
SE_02_040900422 chr7:22785019-22823769 Sample_02_0409 Kidney G401_NoDox 422 7 1319 184 6 16 223 TOMM7,SNORD93
SE_02_101700810 chr7:22791285-22823709 Sample_02_1017 Embryo H9_Mesendoderm 24h_Hydroxyurea 810 6 1095 165 5 16 223 TOMM7,SNORD93
SE_02_081600554 chr7:22800506-22867787 Sample_02_0816 Ovary Clear cell ovarian cancer 554 19 1965 296 9 39 265 SNORD93,TOMM7
SE_02_101600429 chr7:22800678-22823535 Sample_02_1016 Embryo H9_Mesendoderm_24h 429 6 714 112 5 16 223 TOMM7,SNORD93
SE_02_075700539 chr7:22801147-22834898 Sample_02_0757 Embryo ES-derived progenitors_FOXA2 -/- 539 12 974 162 7 21 223 TOMM7,SNORD93
SE_02_006500212 chr7:22801601-22823840 Sample_02_0065 Embryo KO2-Late_G1 212 3 675 110 5 16 223 TOMM7,SNORD93
SE_02_006600174 chr7:22801631-22822225 Sample_02_0066 Embryo AzL-S_phase 174 3 622 99 5 10 124 TOMM7,SNORD93
SE_02_075600711 chr7:22801631-22823410 Sample_02_0756 Embryo ES-derived progenitors_FG FOXA2 -/- 711 6 668 110 5 16 223 TOMM7,SNORD93
SE_02_012400012 chr7:22801642-22861485 Sample_02_0124 Embryo Embryonic-stem-cells_Naive 12 6 1732 266 9 25 265 SNORD93,TOMM7
SE_02_006700172 chr7:22801665-22823470 Sample_02_0067 Embryo AzH-G2/M 172 4 667 110 5 16 223 TOMM7,SNORD93
SE_02_032800128 chr7:22801670-22824251 Sample_02_0328 Embryo H9_naive 128 4 674 111 5 16 223 TOMM7,SNORD93
SE_00_002400350 chr7:22801720-22823119 Sample_00_0024 Embryo mesendoderm 350 5 655 109 5 16 223 TOMM7,SNORD93
SE_02_004200066 chr7:22801720-22824440 Sample_02_0042 Embryo endodermal CyT49_ES_D0 66 4 677 111 5 16 223 TOMM7,SNORD93
SE_02_157000173 chr7:22801723-22822865 Sample_02_1570 iPSCs EiPSC 173 10 635 104 5 15 200 TOMM7,SNORD93
SE_02_006400126 chr7:22801742-22823718 Sample_02_0064 Embryo DN-Early_G1 126 4 666 110 5 16 223 TOMM7,SNORD93
SE_02_003601072 chr7:22801751-22823107 Sample_02_0036 Embryo H7 1072 6 654 109 5 16 223 TOMM7,SNORD93
SE_02_156700269 chr7:22801758-22821111 Sample_02_1567 iPSCs CiPSC 269 9 579 89 5 9 124 TOMM7,SNORD93
SE_02_145700108 chr7:22801765-22822887 Sample_02_1457 Embryo HUES8 WT 108 5 637 105 5 16 204 TOMM7,SNORD93
SE_02_075400947 chr7:22801773-22834568 Sample_02_0754 Embryo ES-derived progenitors Pancreatic Progenitors 1 WT 947 8 938 160 7 21 223 TOMM7,SNORD93
SE_02_157200089 chr7:22801777-22823553 Sample_02_1572 iPSCs FiPSC 89 9 665 110 5 16 223 TOMM7,SNORD93
SE_02_003800538 chr7:22801821-22865606 Sample_02_0038 Embryo DE 538 9 1839 276 9 39 265 SNORD93,TOMM7
SE_02_004300411 chr7:22801853-22823067 Sample_02_0043 Embryo endodermal CyT49_ES_D2 411 5 646 107 5 16 223 TOMM7,SNORD93
SE_02_074200248 chr7:22802305-22813891 Sample_02_0742 Embryo ESCs_day0 248 7 328 36 1 4 89 TOMM7,SNORD93
SE_02_041800377 chr7:22802830-22812598 Sample_02_0418 Embryo H9_Null+EZH2 377 3 282 29 0 0 16 TOMM7,SNORD93
SE_02_075200422 chr7:22807067-22858645 Sample_02_0752 Embryo ES-derived progenitors_DE_wild type 422 7 1473 237 8 25 265 SNORD93,TOMM7
SE_02_018500030 chr7:22807419-22861457 Sample_02_0185 Skin UACC257 30 13 1551 252 9 25 265 SNORD93,TOMM7
SE_02_093700172 chr7:22808220-22867989 Sample_02_0937 Retinal Pigmented Epithelial RPE190_Con 172 17 1717 281 9 39 265 SNORD93,TOMM7
SE_02_028600506 chr7:22809276-22823760 Sample_02_0286 Liver HuH7_IL-1alpha_1h 506 2 436 92 5 16 223 TOMM7,SNORD93
SE_02_018100174 chr7:22809589-22861324 Sample_02_0181 melanoma COLO679 174 8 1482 244 9 25 265 SNORD93,TOMM7
SE_01_003100301 chr7:22809749-22813849 Sample_01_0031 Skin GM23338 301 1 106 17 1 4 89 TOMM7,SNORD93
SE_02_035900019 chr7:22809983-22862369 Sample_02_0359 Colon Colo741 19 6 1507 242 9 25 265 SNORD93,TOMM7
SE_02_018400101 chr7:22810265-22865625 Sample_02_0184 Skin SKMEL30 101 17 1589 253 9 39 265 SNORD93,TOMM7
SE_02_017200457 chr7:22810349-22869055 Sample_02_0172 Lung IMR-90_quiescent 457 9 1695 278 9 39 265 SNORD93,TOMM7
Genomic distribution of SEs associated with TOMM7
Genome Browser

The strength of the tissue affected by the gene

Expression of TOMM7

Cell line (ENCODE) Primary cell (ENCODE)Tissue (NCBI) Normal tissue (GTEx) Cell line (CCLE)