SEdb 2.0
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Gene overview

Strategies/Algorithm: closest_active Ensembl ID: ENSG00000150403
Gene: TMCO3 Gene type: protein_coding
Strand: + External links:
Genomic region: chr13:113491021-113554590 Genome Browser:

Super-enhancer search result of gene-based

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SE ID SE Region Sample ID Tissue type Biosample name SE rank Element Common SNP eQTL Risk SNP TFBS CRISPR Cas9 Gene
SE_02_074700897 chr13:113479340-113509420 Sample_02_0747 Embryo ES derived ventricular cardiomyocyte_day80 897 14 968 200 0 41 725 TMCO3,DCUN1D2,ADPRHL1
SE_02_092500566 chr13:113482300-113501998 Sample_02_0925 Heart fetal heart_PCW17_12570 566 5 594 110 0 29 652 TMCO3,DCUN1D2,ADPRHL1
SE_02_092400880 chr13:113482897-113501552 Sample_02_0924 Heart fetal heart_PCW10_12569 880 7 554 107 0 27 608 TMCO3,DCUN1D2,ADPRHL1
SE_02_103500917 chr13:113483579-113503047 Sample_02_1035 Mammary gland HCC70_Vehicle 917 4 611 119 0 29 666 TMCO3,DCUN1D2,ADPRHL1
SE_02_103600794 chr13:113483601-113503040 Sample_02_1036 Mammary gland HCC70_XY018 794 5 609 119 0 29 666 TMCO3,DCUN1D2,ADPRHL1
SE_02_103400741 chr13:113488137-113528689 Sample_02_1034 Blood AML cell 741 7 1389 335 0 34 732 TMCO3,DCUN1D2,ADPRHL1
SE_02_113600795 chr13:113489108-113494794 Sample_02_1136 Bone U2OS-anaphase/telophase 795 1 164 27 0 0 334 TMCO3,DCUN1D2,ADPRHL1
SE_02_116801125 chr13:113489177-113496035 Sample_02_1168 Biliary H69_TGF Vehicle_2 1125 4 221 37 0 8 416 TMCO3,DCUN1D2,ADPRHL1
SE_02_158400703 chr13:113489218-113500344 Sample_02_1584 Brain U87 GBM_Mock 703 2 356 75 0 16 527 TMCO3,DCUN1D2,ADPRHL1
SE_02_064300293 chr13:113489239-113494207 Sample_02_0643 Mammary gland MDA-MB-436 293 1 137 21 0 0 334 TMCO3,DCUN1D2,ADPRHL1
SE_02_034600373 chr13:113490474-113509185 Sample_02_0346 Blood AML10 373 3 647 173 0 24 610 TMCO3,DCUN1D2,ADPRHL1
SE_02_104701572 chr13:113495495-113565307 Sample_02_1047 Peripheral blood CD4+ cells_CTCL1181 1572 21 2462 493 4 70 805 TMCO3,DCUN1D2,ADPRHL1,TFDP1
SE_02_104602260 chr13:113495911-113537039 Sample_02_1046 Peripheral blood CD4+ cells_CTCL1145 2260 17 1448 332 0 34 382 TMCO3,DCUN1D2,ADPRHL1,TFDP1
SE_02_037600316 chr13:113525453-113547613 Sample_02_0376 Skeletal muscle RMS237 316 3 807 123 1 17 212 TMCO3,TFDP1,DCUN1D2
SE_00_005300451 chr13:113528147-113546469 Sample_00_0053 Embryo trophoblast cell originated from H1 451 9 650 94 1 12 118 TMCO3,TFDP1,DCUN1D2
Genomic distribution of SEs associated with TMCO3
Genome Browser

The strength of the tissue affected by the gene

Expression of TMCO3

Cell line (ENCODE) Primary cell (ENCODE)Tissue (NCBI) Normal tissue (GTEx) Cell line (CCLE)