Gene overview
| Strategies/Algorithm: | closest_active | Ensembl ID: | ENSG00000221995 |
| Gene: | TIAF1 | Gene type: | protein_coding |
| Strand: | - | External links: |
|
| Genomic region: | chr17:29073521-29078857 | Genome Browser: |   |
Super-enhancer search result of gene-based
| SE ID | SE Region | Sample ID | Tissue type | Biosample name | SE rank | Element | Common SNP | eQTL | Risk SNP | TFBS | CRISPR Cas9 | Gene |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| SE_02_074000001 | chr17:29013719-29120128 |
Sample_02_0740 | Muscle | RH3 | 1 | 30 | 2958 | 221 | 6 | 1024 | 4556 | TIAF1,MYO18A,PIPOX,SEZ6 |
| SE_02_143200113 | chr17:29016622-29178259 |
Sample_02_1432 | Bone | A673 STAG2 WT | 113 | 74 | 4342 | 323 | 18 | 1337 | 5558 | TIAF1,MYO18A,PIPOX,SEZ6 |
| SE_02_027800053 | chr17:29023507-29114234 |
Sample_02_0278 | Retina | FW24 | 53 | 14 | 2535 | 191 | 6 | 876 | 3945 | PIPOX,TIAF1,MYO18A,SEZ6 |
| SE_02_095600033 | chr17:29024336-29160131 |
Sample_02_0956 | Brain | IDH1_2658 | 33 | 32 | 3641 | 263 | 14 | 1154 | 5143 | TIAF1,MYO18A,PIPOX,SEZ6 |
| SE_02_119300052 | chr17:29024532-29117214 |
Sample_02_1193 | Brain | GBM27 | 52 | 25 | 2589 | 193 | 6 | 901 | 4314 | TIAF1,MYO18A,PIPOX,SEZ6 |
| SE_02_118200073 | chr17:29024537-29112765 |
Sample_02_1182 | Brain | GBM11 | 73 | 21 | 2463 | 183 | 5 | 866 | 3853 | TIAF1,MYO18A,PIPOX,SEZ6 |
| SE_02_097700025 | chr17:29024620-29117010 |
Sample_02_0977 | Brain | 2089_H3.3K27WT | 25 | 32 | 2579 | 192 | 6 | 898 | 4314 | TIAF1,MYO18A,PIPOX,SEZ6 |
| SE_02_119400043 | chr17:29024636-29159869 |
Sample_02_1194 | Brain | GBM28 | 43 | 52 | 3629 | 263 | 14 | 1147 | 5143 | TIAF1,MYO18A,PIPOX,SEZ6 |
| SE_02_118000029 | chr17:29027087-29114173 |
Sample_02_1180 | Brain | GBM09 | 29 | 20 | 2418 | 171 | 6 | 861 | 3936 | TIAF1,MYO18A,PIPOX,SEZ6 |
| SE_02_118300042 | chr17:29027112-29117235 |
Sample_02_1183 | Brain | GBM12 | 42 | 41 | 2509 | 176 | 6 | 889 | 4314 | TIAF1,MYO18A,PIPOX,SEZ6 |
| SE_02_118700041 | chr17:29027128-29113968 |
Sample_02_1187 | Brain | GBM16 | 41 | 25 | 2411 | 170 | 5 | 858 | 3893 | TIAF1,MYO18A,PIPOX,SEZ6 |
| SE_02_118800116 | chr17:29027351-29114204 |
Sample_02_1188 | Brain | GBM18 | 116 | 26 | 2415 | 171 | 6 | 860 | 3940 | TIAF1,MYO18A,PIPOX,SEZ6 |
| SE_02_119600076 | chr17:29027361-29163476 |
Sample_02_1196 | Brain | GBM32 | 76 | 58 | 3616 | 250 | 14 | 1144 | 5143 | TIAF1,MYO18A,PIPOX,SEZ6 |
| SE_02_121100079 | chr17:29027457-29113873 |
Sample_02_1211 | Brain | GBM21 | 79 | 23 | 2402 | 170 | 5 | 857 | 3863 | TIAF1,MYO18A,PIPOX,SEZ6 |
| SE_02_119100050 | chr17:29027459-29160071 |
Sample_02_1191 | Brain | GBM25 | 50 | 35 | 3548 | 246 | 14 | 1139 | 5143 | TIAF1,MYO18A,PIPOX,SEZ6 |
| SE_02_119700057 | chr17:29027486-29159806 |
Sample_02_1197 | Brain | GBM33 | 57 | 46 | 3542 | 246 | 14 | 1138 | 5143 | TIAF1,MYO18A,PIPOX,SEZ6 |
| SE_02_141300010 | chr17:29027487-29117273 |
Sample_02_1413 | Muscle | RH4_sgBRG1 | 10 | 23 | 2503 | 176 | 6 | 888 | 4314 | TIAF1,MYO18A,PIPOX,SEZ6 |
| SE_02_108100082 | chr17:29032356-29114298 |
Sample_02_1081 | Muscle | CTR shCtrl | 82 | 22 | 2263 | 160 | 6 | 815 | 3953 | TIAF1,MYO18A,PIPOX,SEZ6 |
| SE_02_027700057 | chr17:29035326-29113556 |
Sample_02_0277 | Retina | FW18 | 57 | 12 | 2177 | 152 | 5 | 801 | 3853 | PIPOX,TIAF1,MYO18A,SEZ6 |
| SE_02_107800016 | chr17:29035646-29119341 |
Sample_02_1078 | Muscle | RMS235_PAX3-NCOA1 | 16 | 32 | 2318 | 162 | 6 | 844 | 4513 | TIAF1,MYO18A,PIPOX,SEZ6 |
| SE_02_030000013 | chr17:29036071-29116849 |
Sample_02_0300 | Neuroblastoma | CLB-PE | 13 | 8 | 2250 | 157 | 6 | 832 | 4314 | PIPOX,TIAF1,MYO18A,SEZ6 |
| SE_02_037000006 | chr17:29036312-29119758 |
Sample_02_0370 | Skeletal muscle | RH4 | 6 | 9 | 2306 | 162 | 6 | 850 | 4556 | PIPOX,TIAF1,MYO18A,SEZ6 |
| SE_02_037100016 | chr17:29036351-29120899 |
Sample_02_0371 | Skeletal muscle | RH5 | 16 | 10 | 2329 | 162 | 6 | 867 | 4667 | PIPOX,TIAF1,MYO18A,SEZ6 |
| SE_02_037800013 | chr17:29036546-29114844 |
Sample_02_0378 | Skeletal muscle | SCMC | 13 | 9 | 2169 | 152 | 6 | 810 | 3971 | PIPOX,TIAF1,MYO18A,SEZ6 |
| SE_02_036400071 | chr17:29037164-29115107 |
Sample_02_0364 | Skeletal muscle | CTR | 71 | 10 | 2165 | 151 | 6 | 810 | 4022 | PIPOX,TIAF1,MYO18A,SEZ6 |
| SE_02_037400006 | chr17:29037329-29116685 |
Sample_02_0374 | Skeletal muscle | RMS209 | 6 | 14 | 2216 | 153 | 6 | 824 | 4314 | PIPOX,TIAF1,MYO18A,SEZ6 |
| SE_02_107900007 | chr17:29037368-29115879 |
Sample_02_1079 | Muscle | RMS246_PAX3-NCOA1 | 7 | 30 | 2182 | 151 | 6 | 817 | 4220 | TIAF1,MYO18A,PIPOX,SEZ6 |
| SE_02_108300310 | chr17:29037404-29112899 |
Sample_02_1083 | Macula | macula | 310 | 28 | 2097 | 146 | 5 | 790 | 3853 | TIAF1,MYO18A,PIPOX,SEZ6 |
| SE_02_031300025 | chr17:29037482-29112858 |
Sample_02_0313 | Neuroblastoma | SK-N-DZ | 25 | 16 | 2093 | 145 | 5 | 790 | 3853 | PIPOX,TIAF1,MYO18A,SEZ6 |
| SE_02_118600293 | chr17:29037484-29112746 |
Sample_02_1186 | Brain | GBM15 | 293 | 20 | 2092 | 145 | 5 | 790 | 3853 | TIAF1,MYO18A,PIPOX,SEZ6 |
| SE_02_108200230 | chr17:29037542-29117442 |
Sample_02_1082 | Retina | retina | 230 | 32 | 2223 | 156 | 6 | 828 | 4314 | TIAF1,MYO18A,PIPOX,SEZ6 |
| SE_02_025200177 | chr17:29037552-29116969 |
Sample_02_0252 | Neuroblastoma | IMR5-75-shMYCN-MYCN_high | 177 | 14 | 2209 | 154 | 6 | 824 | 4314 | PIPOX,TIAF1,MYO18A,SEZ6 |
| SE_02_080000102 | chr17:29037558-29091956 |
Sample_02_0800 | Brain | 3679 | 102 | 12 | 1531 | 108 | 4 | 577 | 1969 | TIAF1,MYO18A,PIPOX,SEZ6 |
| SE_02_095700103 | chr17:29037581-29113975 |
Sample_02_0957 | Brain | 429_Tumor_H3.3K27WT | 103 | 20 | 2118 | 149 | 5 | 792 | 3894 | TIAF1,MYO18A,PIPOX,SEZ6 |
| SE_02_097900597 | chr17:29037589-29092598 |
Sample_02_0979 | Brain | JN14-BS1_H3.3K27M | 597 | 11 | 1545 | 108 | 4 | 603 | 2064 | TIAF1,MYO18A,PIPOX,SEZ6 |
| SE_02_117800142 | chr17:29037633-29113552 |
Sample_02_1178 | Brain | GBM07 | 142 | 15 | 2105 | 146 | 5 | 792 | 3853 | TIAF1,MYO18A,PIPOX,SEZ6 |
| SE_02_110000141 | chr17:29037654-29156315 |
Sample_02_1100 | Brain | COG-N-415 | 141 | 56 | 3170 | 222 | 13 | 1057 | 5143 | TIAF1,MYO18A,PIPOX,SEZ6 |
| SE_02_110500067 | chr17:29037669-29156418 |
Sample_02_1105 | Brain | NBL-S | 67 | 44 | 3172 | 222 | 13 | 1057 | 5143 | TIAF1,MYO18A,PIPOX,SEZ6 |
| SE_02_110600071 | chr17:29037674-29163419 |
Sample_02_1106 | Brain | NGP | 71 | 63 | 3324 | 229 | 14 | 1079 | 5143 | TIAF1,MYO18A,PIPOX,SEZ6 |
| SE_02_120400773 | chr17:29037707-29117206 |
Sample_02_1204 | Brain | NB2 | 773 | 17 | 2210 | 155 | 6 | 823 | 4314 | TIAF1,MYO18A,PIPOX,SEZ6 |
| SE_02_110200163 | chr17:29037741-29177100 |
Sample_02_1102 | Brain | LA-N-5 | 163 | 76 | 3714 | 265 | 17 | 1169 | 5558 | TIAF1,MYO18A,PIPOX,SEZ6 |
| SE_02_117400467 | chr17:29037904-29091886 |
Sample_02_1174 | Brain | GBM02 | 467 | 19 | 1513 | 105 | 4 | 570 | 1969 | TIAF1,MYO18A,PIPOX,SEZ6 |
| SE_02_097600298 | chr17:29037932-29103048 |
Sample_02_0976 | Brain | H3.3K27M-KO_DIPGXIII-c5p5-Rx_R1_cells_h3k27ac | 298 | 16 | 1818 | 123 | 4 | 702 | 3206 | TIAF1,MYO18A,PIPOX,SEZ6 |
| SE_02_118500512 | chr17:29038037-29112620 |
Sample_02_1185 | Brain | GBM14 | 512 | 26 | 2068 | 142 | 5 | 787 | 3853 | TIAF1,MYO18A,PIPOX,SEZ6 |
| SE_02_133000681 | chr17:29039952-29079274 |
Sample_02_1330 | Blood | AMU-AML1 | 681 | 12 | 1072 | 70 | 1 | 375 | 1335 | TIAF1,MYO18A,PIPOX,SEZ6 |
| SE_02_010200708 | chr17:29040009-29079773 |
Sample_02_0102 | Peripheral blood | Macrophages_GM-CSF_72h_IL4 | 708 | 4 | 1077 | 70 | 1 | 377 | 1335 | PIPOX,TIAF1,MYO18A,SEZ6 |
| SE_02_066300191 | chr17:29044903-29098548 |
Sample_02_0663 | Thyroid | TT | 191 | 16 | 1510 | 103 | 4 | 599 | 2743 | TIAF1,MYO18A,PIPOX,SEZ6 |
| SE_02_104600152 | chr17:29044940-29198105 |
Sample_02_1046 | Peripheral blood | CD4+ cells_CTCL1145 | 152 | 54 | 4020 | 283 | 22 | 1141 | 5497 | TIAF1,MYO18A,PIPOX,CRYBA1,SEZ6 |
| SE_02_117300186 | chr17:29057684-29163896 |
Sample_02_1173 | Brain | GBM01 | 186 | 37 | 2784 | 189 | 14 | 866 | 4273 | TIAF1,MYO18A,PIPOX |
| SE_02_074700226 | chr17:29060412-29157244 |
Sample_02_0747 | Embryo | ES derived ventricular cardiomyocyte_day80 | 226 | 46 | 2552 | 173 | 13 | 830 | 4273 | TIAF1,MYO18A,PIPOX |
| SE_02_121300146 | chr17:29060481-29181961 |
Sample_02_1213 | Brain | GBM31 | 146 | 37 | 3170 | 228 | 19 | 982 | 4830 | TIAF1,MYO18A,PIPOX |
| SE_02_007200221 | chr17:29064985-29074712 |
Sample_02_0072 | Lung | NCI-H82_DMSO | 221 | 3 | 269 | 14 | 1 | 89 | 276 | TIAF1,MYO18A,PIPOX |
| SE_02_128800017 | chr17:29065240-29176750 |
Sample_02_1288 | Lung | NCI-H524_p8-15 | 17 | 42 | 2956 | 213 | 17 | 898 | 4640 | TIAF1,MYO18A,PIPOX |
| SE_02_036800034 | chr17:29069020-29149792 |
Sample_02_0368 | Skeletal muscle | NS134 | 34 | 9 | 2172 | 154 | 12 | 707 | 4273 | TIAF1,MYO18A,PIPOX |
| SE_02_129000186 | chr17:29070395-29102766 |
Sample_02_1290 | Lung | NCI-H69_p8-15 | 186 | 7 | 945 | 68 | 4 | 382 | 2336 | TIAF1,MYO18A,PIPOX |
| SE_02_096900052 | chr17:29076304-29178439 |
Sample_02_0969 | Brain | H3.3K27M_PL637 | 52 | 29 | 2678 | 202 | 17 | 819 | 4223 | MYO18A,TIAF1,PIPOX |
| SE_02_059401148 | chr17:29076349-29117808 |
Sample_02_0594 | iPSC-derived | neural progenitors | 1148 | 11 | 1160 | 90 | 5 | 465 | 2979 | MYO18A,TIAF1,PIPOX |
| SE_02_085700416 | chr17:29076545-29115840 |
Sample_02_0857 | Glioblastoma | Glioblastoma neurosphere cell_HF-3035 | 416 | 8 | 1096 | 84 | 5 | 440 | 2876 | MYO18A,TIAF1,PIPOX |
| SE_02_105800982 | chr17:29076569-29124688 |
Sample_02_1058 | Bone | A673_SA2 Rescue | 982 | 20 | 1332 | 100 | 7 | 516 | 3655 | MYO18A,TIAF1,PIPOX |
| SE_02_120000578 | chr17:29076689-29116800 |
Sample_02_1200 | Brain | GBM36 | 578 | 10 | 1128 | 87 | 5 | 445 | 2979 | MYO18A,TIAF1,PIPOX |
| SE_02_119800670 | chr17:29076725-29114182 |
Sample_02_1198 | Brain | GBM34 | 670 | 15 | 1046 | 83 | 5 | 417 | 2604 | MYO18A,TIAF1,PIPOX |
| SE_02_138500350 | chr17:29076823-29178221 |
Sample_02_1385 | Other | iPSCs | 350 | 33 | 2660 | 201 | 17 | 797 | 4223 | MYO18A,TIAF1,PIPOX |
| SE_02_080100542 | chr17:29076923-29092271 |
Sample_02_0801 | Brain | 2235 | 542 | 5 | 457 | 40 | 3 | 215 | 658 | MYO18A,TIAF1,PIPOX |
| SE_02_079400246 | chr17:29076938-29112820 |
Sample_02_0794 | Brain | 1552 | 246 | 9 | 1005 | 77 | 4 | 410 | 2518 | MYO18A,TIAF1,PIPOX |
| SE_02_079800171 | chr17:29076953-29117170 |
Sample_02_0798 | Brain | 1919 | 171 | 14 | 1128 | 86 | 5 | 444 | 2979 | MYO18A,TIAF1,PIPOX |
| SE_01_009400248 | chr17:29078172-29156646 |
Sample_01_0094 | Gastrocnemius medialis | gastrocnemius medialis_54y | 248 | 20 | 2062 | 146 | 12 | 667 | 3808 | MYO18A,TIAF1,PIPOX |
| SE_02_087700417 | chr17:29078240-29113522 |
Sample_02_0877 | Muscle | SMS-CTR_CASZ1b_Dox | 417 | 15 | 985 | 70 | 4 | 401 | 2518 | MYO18A,TIAF1,PIPOX |
| SE_01_007600455 | chr17:29078491-29157302 |
Sample_01_0076 | Gastrocnemius medialis | gastrocnemius-medialis | 455 | 9 | 2075 | 146 | 12 | 668 | 3808 | MYO18A,PIPOX,TIAF1 |
| SE_01_009800583 | chr17:29078850-29157295 |
Sample_01_0098 | Heart | left ventricle_51y | 583 | 16 | 2068 | 146 | 12 | 655 | 3808 | MYO18A,TIAF1,PIPOX |
| SE_02_095500089 | chr17:29079143-29149615 |
Sample_02_0955 | Brain | IDH1_2469 | 89 | 19 | 1878 | 134 | 11 | 607 | 3808 | MYO18A,TIAF1,PIPOX |
| SE_02_030800252 | chr17:29082380-29112090 |
Sample_02_0308 | Neuroblastoma | SJNB1 | 252 | 5 | 850 | 64 | 4 | 338 | 2474 | MYO18A,PIPOX,TIAF1 |
| SE_02_075800064 | chr17:29082756-29149628 |
Sample_02_0758 | Peripheral blood | REH | 64 | 29 | 1777 | 129 | 11 | 566 | 3715 | MYO18A,TIAF1,PIPOX |
| SE_02_097800544 | chr17:29084400-29113411 |
Sample_02_0978 | Brain | 2168_IDH1 | 544 | 5 | 810 | 57 | 4 | 308 | 2425 | MYO18A,TIAF1,PIPOX |
| SE_02_074600256 | chr17:29085271-29156561 |
Sample_02_0746 | Embryo | ES derived primitive cardiomyocite_day15 | 256 | 24 | 1855 | 131 | 12 | 548 | 3715 | MYO18A,TIAF1,PIPOX |
| SE_02_074200204 | chr17:29087545-29156617 |
Sample_02_0742 | Embryo | ESCs_day0 | 204 | 16 | 1778 | 123 | 11 | 534 | 3430 | MYO18A,TIAF1,PIPOX |
| SE_00_001001270 | chr17:29089318-29103304 |
Sample_00_0010 | Embryo | endodermal-cell | 1270 | 2 | 397 | 23 | 2 | 180 | 1493 | MYO18A,PIPOX,TIAF1 |
| SE_02_116000064 | chr17:29091314-29161819 |
Sample_02_1160 | Embryo | H1_shLuc | 64 | 16 | 1786 | 120 | 10 | 527 | 3174 | MYO18A,TIAF1,PIPOX,SEZ6 |
| SE_00_003100852 | chr17:29099953-29111453 |
Sample_00_0031 | Placenta | placenta | 852 | 1 | 296 | 21 | 1 | 87 | 514 | MYO18A,TIAF1 |
| SE_02_092500576 | chr17:29102299-29149418 |
Sample_02_0925 | Heart | fetal heart_PCW17_12570 | 576 | 19 | 1193 | 84 | 8 | 313 | 1937 | MYO18A,TIAF1 |
| SE_00_003000375 | chr17:29106732-29109700 |
Sample_00_0030 | Pancreas | pancreas | 375 | 2 | 75 | 6 | 0 | 50 | 117 | MYO18A,TIAF1 |
| SE_02_158600462 | chr17:29111422-29118021 |
Sample_02_1586 | Blood | SupB15 ACY1035 | 462 | 9 | 186 | 15 | 1 | 48 | 631 | MYO18A,TIAF1 |
| SE_02_018800042 | chr17:29149945-29160220 |
Sample_02_0188 | Stomach | MKN1 | 42 | 3 | 241 | 14 | 2 | 50 | 0 | MYO18A,TIAF1 |
Genomic distribution of SEs associated with TIAF1