SEdb 2.0
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Gene overview

Strategies/Algorithm: closest_active Ensembl ID: ENSG00000143469
Gene: SYT14 Gene type: protein_coding
Strand: + External links:
Genomic region: chr1:209900923-210171389 Genome Browser:

Super-enhancer search result of gene-based

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SE ID SE Region Sample ID Tissue type Biosample name SE rank Element Common SNP eQTL Risk SNP TFBS CRISPR Cas9 Gene
SE_02_105900704 chr1:209859949-209911256 Sample_02_1059 Bone A673_WT 704 15 1380 126 5 40 0 SYT14,DIEXF
SE_02_147300711 chr1:209859949-209911256 Sample_02_1473 Bone A-673 711 15 1380 126 5 40 0 SYT14,DIEXF
SE_02_006300408 chr1:209863358-209902818 Sample_02_0063 Skin Keratinocytes 408 5 1133 114 5 36 0 SYT14,C1ORF107
SE_01_004100066 chr1:209863639-209902726 Sample_01_0041 Skin keratinocyte 66 6 1127 114 5 36 0 SYT14,C1ORF107
SE_02_113600256 chr1:209863656-209902643 Sample_02_1136 Bone U2OS-anaphase/telophase 256 14 1126 114 5 36 0 SYT14,DIEXF
SE_01_004500068 chr1:209863736-209904958 Sample_01_0045 Mammary gland mammary-epithelial-cell 68 7 1186 121 5 36 0 SYT14,C1ORF107
SE_02_111500210 chr1:209863884-209902599 Sample_02_1115 Liver HepG2 210 15 1124 114 5 36 0 SYT14,DIEXF
SE_02_135900567 chr1:209864044-209902509 Sample_02_1359 Other IC8-deltaEGF-L1596H_GSI_4h 567 11 1120 114 5 36 0 SYT14,DIEXF
SE_02_028100225 chr1:209868907-209897860 Sample_02_0281 Bone U2OS 225 2 829 84 5 35 0 SYT14,C1ORF107
SE_02_005700860 chr1:209870162-209901575 Sample_02_0057 Mammary gland vHMEC 860 10 926 81 5 35 0 SYT14,C1ORF107
SE_02_007400355 chr1:209871188-209901798 Sample_02_0074 Other 90-8TL_PDJQ 355 7 904 73 5 35 0 SYT14,C1ORF107
SE_02_126200404 chr1:209871415-209901566 Sample_02_1262 Bone Im-GCT-3504_G34W 404 13 892 72 5 35 0 SYT14,DIEXF
SE_02_113700654 chr1:209871751-209901700 Sample_02_1137 Retinal Pigmented Epithelial RPE1-interphase 654 13 884 70 5 35 0 SYT14,DIEXF
SE_02_135700691 chr1:209871818-209901828 Sample_02_1357 Other IC8-deltaEGF-L1596H_GSI_0h 691 13 889 70 5 35 0 SYT14,DIEXF
SE_02_112000298 chr1:209871835-209900902 Sample_02_1120 Neonatal foreskin keratinocytes_CTR 298 12 867 69 5 35 0 SYT14,DIEXF,G0S2,C1orf74
SE_02_011200427 chr1:209871882-209901613 Sample_02_0112 Connective tissue HT1080_untreated 427 4 879 70 5 35 0 SYT14,C1ORF107
SE_02_011300324 chr1:209871892-209901567 Sample_02_0113 Connective tissue HT1080_DOX5d 324 4 879 70 5 35 0 SYT14,C1ORF107
SE_02_113801142 chr1:209871940-209901322 Sample_02_1138 Retinal Pigmented Epithelial RPE1-prometaphase 1142 8 871 69 5 35 0 SYT14,DIEXF
SE_02_108500366 chr1:209872014-209901579 Sample_02_1085 Retinal Pigmented Epithelial hTERT-RPE1 366 9 875 70 5 35 0 SYT14,DIEXF
SE_02_126800522 chr1:209872157-209901314 Sample_02_1268 Bone Im-GCT-4072_G34W unedited_U3 522 6 867 69 5 35 0 SYT14,DIEXF
SE_02_113900705 chr1:209872242-209901551 Sample_02_1139 Retinal Pigmented Epithelial RPE1-anaphase/telophase 705 10 872 70 5 35 0 SYT14,DIEXF
SE_00_002300717 chr1:209872263-209896927 Sample_00_0023 Embryo mesenchymal-stem-cell 717 4 709 65 5 35 0 SYT14,C1ORF107
SE_02_137800549 chr1:209872504-209901796 Sample_02_1378 Pancreas Pancreatic_tumor_associated_fibroblasts_CAF08_untreated 549 14 875 70 5 34 0 SYT14,DIEXF
SE_02_081100752 chr1:209872637-209901531 Sample_02_0811 Thyroid BCPAP 752 14 864 70 5 34 0 SYT14,DIEXF
SE_02_156901315 chr1:209872663-209897038 Sample_02_1569 Endothelial Endothelial cells 1315 6 704 65 5 33 0 SYT14,DIEXF
SE_02_105200374 chr1:209872725-209896862 Sample_02_1052 Esophagus JH-EsoAd1 374 10 699 65 5 33 0 SYT14,DIEXF
SE_02_017300743 chr1:209872743-209902174 Sample_02_0173 Lung IMR-90_senescent 743 6 874 72 5 33 0 SYT14,C1ORF107
SE_03_000200299 chr1:209872781-209896800 Sample_03_0002 Foreskin foreskin-keratinocyte-calcium2.5day 299 4 694 65 5 32 0 SYT14,C1ORF107
SE_01_001900236 chr1:209872785-209901840 Sample_01_0019 Brain and spinal cord astrocyte 236 5 868 70 5 33 0 SYT14,C1ORF107
SE_02_020900765 chr1:209873167-209901517 Sample_02_0209 Lung MRC-5_MRC5_1DPT 765 6 851 68 5 33 0 SYT14,C1ORF107
SE_02_126700499 chr1:209873216-209902722 Sample_02_1267 Bone Im-GCT-4072_G34W 499 8 874 70 5 33 0 SYT14,DIEXF
SE_02_087900952 chr1:209873285-209902371 Sample_02_0879 Ovary SVOG3e cells_Dox_12h_control 952 6 864 70 5 33 0 SYT14,DIEXF
SE_02_088100834 chr1:209873289-209902422 Sample_02_0881 Ovary SVOG3e cells_Dox_12h_transduced_V5-FOXL2_WT 834 6 866 70 5 33 0 SYT14,DIEXF
SE_02_088201052 chr1:209873290-209901580 Sample_02_0882 Ovary SVOG3e_cells_noDox_transduced with V5-FOXL2 C134W 1052 8 845 68 5 33 0 SYT14,DIEXF
SE_02_088300762 chr1:209873291-209902801 Sample_02_0883 Ovary SVOG3e_cells_Dox_12h_transduced with V5-FOXL2 C134W 762 8 871 70 5 33 0 SYT14,DIEXF
SE_02_088000963 chr1:209873308-209902731 Sample_02_0880 Ovary SVOG3e cells_noDox_transduced_V5-FOXL2_WT 963 5 871 70 5 33 0 SYT14,DIEXF
SE_02_093600516 chr1:209873312-209901363 Sample_02_0936 Retinal Pigmented Epithelial RPE188_TnT 516 7 838 67 5 33 0 SYT14,DIEXF
SE_02_093800877 chr1:209873319-209901502 Sample_02_0938 Retinal Pigmented Epithelial RPE190_TnT 877 7 844 68 5 33 0 SYT14,DIEXF
SE_02_087801078 chr1:209873372-209902174 Sample_02_0878 Ovary SVOG3e cells_noDox_control 1078 6 857 70 5 33 0 SYT14,DIEXF
SE_02_137900882 chr1:209873376-209901469 Sample_02_1379 Pancreas Pancreatic_tumor_associated_fibroblasts_PS1_untreated 882 10 842 67 5 33 0 SYT14,DIEXF
SE_02_042800291 chr1:209874823-209901837 Sample_02_0428 Kidney 12364284_VHL- 291 9 819 64 5 30 0 SYT14,C1ORF107
SE_02_127901220 chr1:209874916-209902425 Sample_02_1279 Bone Mesenchymal stem cells 1220 8 832 66 5 30 0 SYT14,DIEXF
SE_02_003301179 chr1:209874997-209892127 Sample_02_0033 Pancreas pancreatic-islets-F 1179 4 531 48 4 29 0 SYT14,C1ORF107
SE_02_042900179 chr1:209875261-209901079 Sample_02_0429 Kidney 12364284_VHL+ 179 6 789 62 5 29 0 SYT14,C1ORF107
SE_02_039500792 chr1:209875282-209901681 Sample_02_0395 Mammary gland BT-549 792 7 802 63 5 29 0 SYT14,C1ORF107
SE_02_043000142 chr1:209875352-209902626 Sample_02_0430 Kidney 12364284 142 7 825 65 5 29 0 SYT14,C1ORF107
SE_01_005800455 chr1:209878628-209902945 Sample_01_0058 Prostate PC-3 455 5 719 50 3 22 0 SYT14
SE_02_026800797 chr1:209879112-209901529 Sample_02_0268 Kidney A-498 797 5 674 44 3 22 0 SYT14
SE_02_026900072 chr1:209880604-209901069 Sample_02_0269 Kidney HK-2 72 5 604 40 2 19 0 SYT14
SE_01_005600776 chr1:209882548-209901757 Sample_01_0056 Bone osteoblast 776 4 558 38 1 17 0 SYT14
SE_02_082400078 chr1:209882988-209901291 Sample_02_0824 Stomach LMSU 78 6 532 37 1 16 0 SYT14
SE_02_000700068 chr1:209884103-209897298 Sample_02_0007 Cervical cervical-cancer_vector 68 4 351 29 1 5 0 SYT14
SE_01_005000273 chr1:210059558-210074683 Sample_01_0050 Embryo neural-cell 273 2 332 29 4 0 0 SYT14
Genomic distribution of SEs associated with SYT14
Genome Browser

The strength of the tissue affected by the gene

Expression of SYT14

Cell line (ENCODE) Primary cell (ENCODE)Tissue (NCBI) Normal tissue (GTEx) Cell line (CCLE)